STRINGSTRING
HCAG_07060 HCAG_07060 HCAG_05890 HCAG_05890 HCAG_05299 HCAG_05299 HCAG_07120 HCAG_07120 HCAG_05298 HCAG_05298 HCAG_04631 HCAG_04631 HCAG_04106 HCAG_04106 HCAG_03525 HCAG_03525
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HCAG_07060Chromatin remodelling complex ATPase chain ISW1. (974 aa)
HCAG_05890Uncharacterized protein. (734 aa)
HCAG_05299Uncharacterized protein. (189 aa)
HCAG_07120Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (370 aa)
HCAG_05298Uncharacterized protein. (365 aa)
HCAG_04631U2 snRNP component HSH155. (1189 aa)
HCAG_04106Uncharacterized protein. (298 aa)
HCAG_03525Histone H2B; Belongs to the histone H2B family. (138 aa)
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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