(18 nodes) The canonical retinoid cycle in rods (twilight vision) network (Histoplasma capsulatum NAm1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_04973	Uncharacterized protein. (390 aa)
	HCAG_00398	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (338 aa)
	HCAG_00630	Uncharacterized protein. (402 aa)
	HCAG_00886	Uncharacterized protein. (325 aa)
	HCAG_00928	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (264 aa)
	HCAG_00956	Uncharacterized protein. (463 aa)
	HCAG_01039	Protein kinase domain-containing protein. (619 aa)
	HCAG_01099	DUF2235 domain-containing protein. (752 aa)
	HCAG_01139	Uncharacterized protein. (178 aa)
	HCAG_01619	APH domain-containing protein. (288 aa)
	HCAG_02599	OHCU_decarbox domain-containing protein. (210 aa)
	HCAG_02645	Uncharacterized protein. (110 aa)
	HCAG_02824	Uncharacterized protein. (327 aa)
	HCAG_05047	Uncharacterized protein. (402 aa)
	HCAG_05514	Uncharacterized protein. (320 aa)
	HCAG_06414	Uncharacterized protein. (742 aa)
	HCAG_07161	Uncharacterized protein. (93 aa)
	HCAG_07989	Uncharacterized protein. (156 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00398	HCAG_00886	A6QSP2	A6QU30	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.488
HCAG_00886	HCAG_00398	A6QU30	A6QSP2	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.488
HCAG_00886	HCAG_00928	A6QU30	A6QU72	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.450
HCAG_00886	HCAG_04973	A6QU30	A6R5R5	Uncharacterized protein.	Uncharacterized protein.	0.432
HCAG_00886	HCAG_05514	A6QU30	A6R7A6	Uncharacterized protein.	Uncharacterized protein.	0.446
HCAG_00928	HCAG_00886	A6QU72	A6QU30	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Uncharacterized protein.	0.450
HCAG_00956	HCAG_01099	A6QUA0	A6QUP3	Uncharacterized protein.	DUF2235 domain-containing protein.	0.878
HCAG_01099	HCAG_00956	A6QUP3	A6QUA0	DUF2235 domain-containing protein.	Uncharacterized protein.	0.878
HCAG_04973	HCAG_00886	A6R5R5	A6QU30	Uncharacterized protein.	Uncharacterized protein.	0.432
HCAG_05514	HCAG_00886	A6R7A6	A6QU30	Uncharacterized protein.	Uncharacterized protein.	0.446