29 items (Histoplasma capsulatum NAm1) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00496	Uncharacterized protein. (750 aa)
	HCAG_00846	Uncharacterized protein. (413 aa)
	HCAG_00906	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (129 aa)
	HCAG_01496	Uncharacterized protein. (75 aa)
	HCAG_01528	Uncharacterized protein. (644 aa)
	HCAG_06934	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (506 aa)
	HCAG_06019	Ubiquitin. (128 aa)
	HCAG_05716	BTB domain-containing protein. (867 aa)
	HCAG_05909	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1214 aa)
	HCAG_07073	RING-type domain-containing protein. (379 aa)
	HCAG_06020	Uncharacterized protein. (318 aa)
	HCAG_01938	Uncharacterized protein. (516 aa)
	HCAG_02903	CYCLIN domain-containing protein; Belongs to the cyclin family. (491 aa)
	HCAG_03525	Histone H2B; Belongs to the histone H2B family. (138 aa)
	HCAG_04046	Serine/threonine-protein kinase crk1; Belongs to the protein kinase superfamily. (408 aa)
	HCAG_04427	Uncharacterized protein. (510 aa)
	HCAG_04624	DNA-directed RNA polymerases I and III 40 kDa polypeptide. (380 aa)
	HCAG_04703	Uncharacterized protein. (632 aa)
	HCAG_04864	DNA-directed RNA polymerases I. (177 aa)
	HCAG_05284	SprT-like domain-containing protein. (852 aa)
	HCAG_08910	DNA repair protein Rex1. (72 aa)
	HCAG_07849	Uncharacterized protein. (861 aa)
	HCAG_07759	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (455 aa)
	HCAG_07601	Uncharacterized protein. (738 aa)
	HCAG_06714	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1573 aa)
	HCAG_06715	DNA repair helicase RAD3. (683 aa)
	HCAG_06734	DNA-directed RNA polymerases II 24 kDa polypeptide. (236 aa)
	HCAG_00082	TATA-box binding protein. (268 aa)
	HCAG_00645	Uncharacterized protein. (296 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00082	HCAG_00496	A6QRS6	A6QSZ0	TATA-box binding protein.	Uncharacterized protein.	0.970
HCAG_00082	HCAG_00645	A6QRS6	A6QTD9	TATA-box binding protein.	Uncharacterized protein.	0.791
HCAG_00082	HCAG_00846	A6QRS6	A6QTZ0	TATA-box binding protein.	Uncharacterized protein.	0.967
HCAG_00082	HCAG_00906	A6QRS6	A6QU50	TATA-box binding protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.966
HCAG_00082	HCAG_01496	A6QRS6	A6QVT9	TATA-box binding protein.	Uncharacterized protein.	0.966
HCAG_00082	HCAG_01528	A6QRS6	A6QVX1	TATA-box binding protein.	Uncharacterized protein.	0.967
HCAG_00082	HCAG_01938	A6QRS6	A6QX31	TATA-box binding protein.	Uncharacterized protein.	0.677
HCAG_00082	HCAG_02903	A6QRS6	A6QZU6	TATA-box binding protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.872
HCAG_00082	HCAG_03525	A6QRS6	A6R1L7	TATA-box binding protein.	Histone H2B; Belongs to the histone H2B family.	0.660
HCAG_00082	HCAG_04046	A6QRS6	A6R338	TATA-box binding protein.	Serine/threonine-protein kinase crk1; Belongs to the protein kinase superfamily.	0.968
HCAG_00082	HCAG_04427	A6QRS6	A6R469	TATA-box binding protein.	Uncharacterized protein.	0.695
HCAG_00082	HCAG_04624	A6QRS6	A6R4R6	TATA-box binding protein.	DNA-directed RNA polymerases I and III 40 kDa polypeptide.	0.887
HCAG_00082	HCAG_04703	A6QRS6	A6R4Z5	TATA-box binding protein.	Uncharacterized protein.	0.868
HCAG_00082	HCAG_04864	A6QRS6	A6R5F6	TATA-box binding protein.	DNA-directed RNA polymerases I.	0.970
HCAG_00082	HCAG_05284	A6QRS6	A6R6M6	TATA-box binding protein.	SprT-like domain-containing protein.	0.480
HCAG_00082	HCAG_05909	A6QRS6	A6RAC1	TATA-box binding protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.835
HCAG_00082	HCAG_06019	A6QRS6	A6RAN1	TATA-box binding protein.	Ubiquitin.	0.806
HCAG_00082	HCAG_06020	A6QRS6	A6RAN2	TATA-box binding protein.	Uncharacterized protein.	0.806
HCAG_00082	HCAG_06714	A6QRS6	A6R8S3	TATA-box binding protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.801
HCAG_00082	HCAG_06715	A6QRS6	A6R8S4	TATA-box binding protein.	DNA repair helicase RAD3.	0.956