22 items (Histoplasma capsulatum NAm1) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HCAG_00082	TATA-box binding protein. (268 aa)
	HCAG_00112	Uncharacterized protein. (742 aa)
	HCAG_00422	Uncharacterized protein. (460 aa)
	HCAG_00906	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (129 aa)
	HCAG_01031	Uncharacterized protein. (213 aa)
	HCAG_01496	Uncharacterized protein. (75 aa)
	HCAG_02711	Uncharacterized protein. (693 aa)
	HCAG_02928	Uncharacterized protein. (656 aa)
	HCAG_02929	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (259 aa)
	HCAG_04472	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (363 aa)
	HCAG_04624	DNA-directed RNA polymerases I and III 40 kDa polypeptide. (380 aa)
	HCAG_04846	Uncharacterized protein. (1046 aa)
	HCAG_04864	DNA-directed RNA polymerases I. (177 aa)
	HCAG_06483	B-block_TFIIIC domain-containing protein. (1874 aa)
	HCAG_06637	Uncharacterized protein. (818 aa)
	HCAG_06734	DNA-directed RNA polymerases II 24 kDa polypeptide. (236 aa)
	HCAG_06971	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1186 aa)
	RPC82	DNA-directed RNA polymerase III subunit rpc3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs (By similarity). (649 aa)
	HCAG_05716	BTB domain-containing protein. (867 aa)
	HCAG_08245	SANT domain-containing protein. (542 aa)
	HCAG_08797	RPOL9 domain-containing protein. (140 aa)
	HCAG_08895	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1439 aa)

Your Current Organism:

Histoplasma capsulatum NAm1

NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HCAG_00082	HCAG_00112	A6QRS6	A6QRV6	TATA-box binding protein.	Uncharacterized protein.	0.482
HCAG_00082	HCAG_00422	A6QRS6	A6QSR6	TATA-box binding protein.	Uncharacterized protein.	0.730
HCAG_00082	HCAG_00906	A6QRS6	A6QU50	TATA-box binding protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.966
HCAG_00082	HCAG_01031	A6QRS6	A6QUH5	TATA-box binding protein.	Uncharacterized protein.	0.822
HCAG_00082	HCAG_01496	A6QRS6	A6QVT9	TATA-box binding protein.	Uncharacterized protein.	0.966
HCAG_00082	HCAG_02711	A6QRS6	A6QZA4	TATA-box binding protein.	Uncharacterized protein.	0.853
HCAG_00082	HCAG_02928	A6QRS6	A6QZX1	TATA-box binding protein.	Uncharacterized protein.	0.692
HCAG_00082	HCAG_02929	A6QRS6	A6QZX2	TATA-box binding protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.771
HCAG_00082	HCAG_04472	A6QRS6	A6R4B4	TATA-box binding protein.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.935
HCAG_00082	HCAG_04624	A6QRS6	A6R4R6	TATA-box binding protein.	DNA-directed RNA polymerases I and III 40 kDa polypeptide.	0.887
HCAG_00082	HCAG_04846	A6QRS6	A6R5D8	TATA-box binding protein.	Uncharacterized protein.	0.841
HCAG_00082	HCAG_04864	A6QRS6	A6R5F6	TATA-box binding protein.	DNA-directed RNA polymerases I.	0.970
HCAG_00082	HCAG_06483	A6QRS6	A6R842	TATA-box binding protein.	B-block_TFIIIC domain-containing protein.	0.484
HCAG_00082	HCAG_06637	A6QRS6	A6R8J6	TATA-box binding protein.	Uncharacterized protein.	0.999
HCAG_00082	HCAG_06734	A6QRS6	A6R8U3	TATA-box binding protein.	DNA-directed RNA polymerases II 24 kDa polypeptide.	0.975
HCAG_00082	HCAG_06971	A6QRS6	A6R9I0	TATA-box binding protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.867
HCAG_00082	HCAG_08245	A6QRS6	A6RF30	TATA-box binding protein.	SANT domain-containing protein.	0.998
HCAG_00082	HCAG_08797	A6QRS6	A6RGN0	TATA-box binding protein.	RPOL9 domain-containing protein.	0.845
HCAG_00082	HCAG_08895	A6QRS6	A6RGX8	TATA-box binding protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.896
HCAG_00082	RPC82	A6QRS6	A6R9K6	TATA-box binding protein.	DNA-directed RNA polymerase III subunit rpc3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs (By similarity).	0.914