STRINGSTRING
HCAG_00813 HCAG_00813 HCAG_02508 HCAG_02508 HCAG_02563 HCAG_02563 MEF2 MEF2 HCAG_03444 HCAG_03444 HCAG_03704 HCAG_03704 HCAG_04206 HCAG_04206 HCAG_05988 HCAG_05988 HCAG_06255 HCAG_06255 HCAG_08798 HCAG_08798 GUF1 GUF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HCAG_00813116 kDa U5 small nuclear ribonucleoprotein component. (899 aa)
HCAG_02508Tr-type G domain-containing protein. (968 aa)
HCAG_02563Tr-type G domain-containing protein. (638 aa)
MEF2Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. (871 aa)
HCAG_03444Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (402 aa)
HCAG_03704Tr-type G domain-containing protein. (920 aa)
HCAG_04206Eukaryotic translation initiation factor 2 gamma subunit. (504 aa)
HCAG_05988Tr-type G domain-containing protein. (631 aa)
HCAG_06255Elongation factor G. (351 aa)
HCAG_08798Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (460 aa)
GUF1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (657 aa)
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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