STRINGSTRING
ABY95454.1 ABY95454.1 ABY95677.1 ABY95677.1 rbsK rbsK rbsD rbsD xylA xylA ABY94965.1 ABY94965.1 ABY94269.1 ABY94269.1 ABY94532.1 ABY94532.1 ABY93929.1 ABY93929.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABY95454.1Hypothetical protein. (373 aa)
ABY95677.1PFAM: ROK family protein. (400 aa)
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (309 aa)
rbsDRbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (130 aa)
xylATIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family. (465 aa)
ABY94965.1PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; Belongs to the ribulose-phosphate 3-epimerase family. (216 aa)
ABY94269.1PFAM: ROK family protein. (396 aa)
ABY94532.1PFAM: class II aldolase/adducin family protein. (213 aa)
ABY93929.1PFAM: ROK family protein. (408 aa)
Your Current Organism:
Thermoanaerobacter pseudethanolicus
NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223
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