(32 nodes) Plasma membrane protein complex network (Thermoanaerobacter pseudethanolicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABY95647.1	Hypothetical protein. (105 aa)
	ABY95680.1	PFAM: binding-protein-dependent transport systems inner membrane component. (232 aa)
	ABY95685.1	PFAM: TrkA-N domain protein; TrkA-C domain protein. (215 aa)
	ABY93893.1	Hydrogenase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hydrogenase large subunit domain protein; Fe-S cluster domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (577 aa)
	ABY93932.1	PFAM: binding-protein-dependent transport systems inner membrane component. (277 aa)
	ecfA	ABC transporter related; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (277 aa)
	ecfA-2	ABC transporter related; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (286 aa)
	ABY94131.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (76 aa)
	ABY94225.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase. (374 aa)
	ABY94273.1	PFAM: binding-protein-dependent transport systems inner membrane component. (270 aa)
	ABY94279.1	PFAM: binding-protein-dependent transport systems inner membrane component. (280 aa)
	ABY94291.1	PFAM: binding-protein-dependent transport systems inner membrane component. (275 aa)
	ABY94313.1	PFAM: ABC transporter related; SMART: AAA ATPase. (250 aa)
	ABY94513.1	PFAM: ABC transporter related; SMART: AAA ATPase. (253 aa)
	ABY94527.1	PFAM: RNA-binding S4 domain protein. (248 aa)
	ABY94536.1	PFAM: ABC transporter related; SMART: AAA ATPase. (574 aa)
	ABY95065.1	4Fe-4S ferredoxin, iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (56 aa)
	ABY95106.1	TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein. (581 aa)
	ABY95113.1	Fe-S cluster domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein. (435 aa)
	ABY95161.1	PFAM: binding-protein-dependent transport systems inner membrane component. (277 aa)
	ABY95165.1	Monosaccharide-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component. (269 aa)
	ABY95286.1	PFAM: binding-protein-dependent transport systems inner membrane component. (272 aa)
	ABY95468.1	PFAM: ABC transporter related; SMART: AAA ATPase. (509 aa)
	ABY95516.1	Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (276 aa)
	ABY95517.1	TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein. (255 aa)
	cbiN	Cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (97 aa)
	cbiM	Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (249 aa)
	ABY95535.1	PFAM: ABC transporter related; SMART: AAA ATPase. (266 aa)
	ABY95556.1	PFAM: ABC transporter related; SMART: AAA ATPase. (254 aa)
	ABY95557.1	PFAM: ABC-3 protein. (264 aa)
	ABY95646.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein. (230 aa)
	ABY95649.1	PFAM: ABC transporter related; SMART: AAA ATPase. (242 aa)

Your Current Organism:

Thermoanaerobacter pseudethanolicus

NCBI taxonomy Id: 340099
Other names: Clostridium thermohydrosulfuricum 39E, T. pseudethanolicus ATCC 33223, Thermoanaerobacter ethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus 39E, Thermoanaerobacter pseudethanolicus ATCC 33223, Thermoanaerobacter pseudethanolicus str. ATCC 33223, Thermoanaerobacter pseudethanolicus strain ATCC 33223

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABY93893.1	ABY95106.1	Teth39_0221	Teth39_1456	Hydrogenase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hydrogenase large subunit domain protein; Fe-S cluster domain protein; PAS fold domain protein; SMART: PAS domain containing protein.	TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein.	0.774
ABY93893.1	ABY95113.1	Teth39_0221	Teth39_1463	Hydrogenase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hydrogenase large subunit domain protein; Fe-S cluster domain protein; PAS fold domain protein; SMART: PAS domain containing protein.	Fe-S cluster domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein.	0.590
ABY93932.1	ABY94225.1	Teth39_0263	Teth39_0561	PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	0.908
ABY93932.1	ABY94513.1	Teth39_0263	Teth39_0857	PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: ABC transporter related; SMART: AAA ATPase.	0.594
ABY94131.1	ABY95106.1	Teth39_0464	Teth39_1456	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.	TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein.	0.549
ABY94225.1	ABY93932.1	Teth39_0561	Teth39_0263	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.908
ABY94225.1	ABY94273.1	Teth39_0561	Teth39_0609	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.981
ABY94225.1	ABY94279.1	Teth39_0561	Teth39_0615	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.906
ABY94225.1	ABY94291.1	Teth39_0561	Teth39_0627	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.980
ABY94225.1	ABY95161.1	Teth39_0561	Teth39_1514	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.902
ABY94225.1	ABY95165.1	Teth39_0561	Teth39_1518	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	Monosaccharide-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component.	0.906
ABY94225.1	ABY95680.1	Teth39_0561	Teth39_2056	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.980
ABY94273.1	ABY94225.1	Teth39_0609	Teth39_0561	PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	0.981
ABY94273.1	ABY94291.1	Teth39_0609	Teth39_0627	PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.913
ABY94273.1	ABY94513.1	Teth39_0609	Teth39_0857	PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: ABC transporter related; SMART: AAA ATPase.	0.594
ABY94279.1	ABY94225.1	Teth39_0615	Teth39_0561	PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	0.906
ABY94279.1	ABY94513.1	Teth39_0615	Teth39_0857	PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: ABC transporter related; SMART: AAA ATPase.	0.594
ABY94291.1	ABY94225.1	Teth39_0627	Teth39_0561	PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	0.980
ABY94291.1	ABY94273.1	Teth39_0627	Teth39_0609	PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.913
ABY94291.1	ABY94513.1	Teth39_0627	Teth39_0857	PFAM: binding-protein-dependent transport systems inner membrane component.	PFAM: ABC transporter related; SMART: AAA ATPase.	0.594

page 1 of 6

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About