(7 nodes) Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, and Aspartate/ornithine carbamoyltransferase network (Chlorobium chlorochromatii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	carA	Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. (367 aa)
	Cag_0173	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. (492 aa)
	argF	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. (334 aa)
	argG	Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (399 aa)
	pyrC	Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. (442 aa)
	pyrB	Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (311 aa)
	Cag_1787	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. (621 aa)

Your Current Organism:

Chlorobium chlorochromatii

NCBI taxonomy Id: 340177
Other names: C. chlorochromatii CaD3, Chlorobium chlorochromatii CaD3, Chlorobium chlorochromatii str. CaD3, Chlorobium chlorochromatii strain CaD3

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cag_0173	Cag_1787	Cag_0173	Cag_1787	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	0.923
Cag_0173	argF	Cag_0173	Cag_0775	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	0.967
Cag_0173	argG	Cag_0173	Cag_0777	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.	0.982
Cag_0173	carA	Cag_0173	Cag_0107	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.	0.999
Cag_0173	pyrB	Cag_0173	Cag_1334	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.997
Cag_0173	pyrC	Cag_0173	Cag_0898	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.	0.978
Cag_1787	Cag_0173	Cag_1787	Cag_0173	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	0.923
Cag_1787	argF	Cag_1787	Cag_0775	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	0.964
Cag_1787	argG	Cag_1787	Cag_0777	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.	0.981
Cag_1787	carA	Cag_1787	Cag_0107	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.	0.999
Cag_1787	pyrB	Cag_1787	Cag_1334	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.997
Cag_1787	pyrC	Cag_1787	Cag_0898	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.	0.978
argF	Cag_0173	Cag_0775	Cag_0173	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	0.967
argF	Cag_1787	Cag_0775	Cag_1787	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	0.964
argF	argG	Cag_0775	Cag_0777	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.	0.997
argF	carA	Cag_0775	Cag_0107	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.	0.920
argF	pyrB	Cag_0775	Cag_1334	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.866
argF	pyrC	Cag_0775	Cag_0898	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.	0.547
argG	Cag_0173	Cag_0777	Cag_0173	Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	0.982
argG	Cag_1787	Cag_0777	Cag_1787	Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	0.981

page 1 of 2

Server load: low (10%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About