STRINGSTRING
AB406_0948 AB406_0948 AB406_0918 AB406_0918 yidC yidC AB406_0287 AB406_0287 AB406_1225 AB406_1225 AB406_1555 AB406_1555 ffh ffh AB406_2311 AB406_2311 AB406_1165 AB406_1165 ftsY ftsY rssA rssA AB406_0949 AB406_0949 bamA bamA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AB406_0948Outer membrane chaperone skp (omph). (166 aa)
AB406_0918Surface antigen (d15). (221 aa)
yidCMembrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (596 aa)
AB406_0287Hypothetical protein. (859 aa)
AB406_1225Hypothetical protein. (294 aa)
AB406_1555Hypothetical protein. (405 aa)
ffhSignal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (454 aa)
AB406_2311Putative membrane protein insertion efficiency factor. (43 aa)
AB406_1165Surface antigen (d15). (485 aa)
ftsYSignal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (318 aa)
rssANTE family protein RssA. (721 aa)
AB406_0949Hypothetical protein. (176 aa)
bamAOuter membrane protein assembly factor BamA precursor. (485 aa)
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
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