5 items (Aspergillus terreus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ATEG_00595	Uncharacterized protein. (1795 aa)
	ATEG_01947	Protein NPL4. (566 aa)
	ATEG_09861	Uncharacterized protein. (858 aa)
	ATEG_04847	Uncharacterized protein. (365 aa)
	ATEG_02933	Uncharacterized protein. (729 aa)

Your Current Organism:

Aspergillus terreus

NCBI taxonomy Id: 341663
Other names: A. terreus NIH2624, Aspergillus terreus FGSC A1156, Aspergillus terreus NIH2624

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATEG_00595	ATEG_01947	Q0D0D9	Q0CWI7	Uncharacterized protein.	Protein NPL4.	0.646
ATEG_00595	ATEG_02933	Q0D0D9	Q0CTQ1	Uncharacterized protein.	Uncharacterized protein.	0.757
ATEG_00595	ATEG_04847	Q0D0D9	Q0CN87	Uncharacterized protein.	Uncharacterized protein.	0.451
ATEG_00595	ATEG_09861	Q0D0D9	Q0C8X3	Uncharacterized protein.	Uncharacterized protein.	0.973
ATEG_01947	ATEG_00595	Q0CWI7	Q0D0D9	Protein NPL4.	Uncharacterized protein.	0.646
ATEG_01947	ATEG_02933	Q0CWI7	Q0CTQ1	Protein NPL4.	Uncharacterized protein.	0.534
ATEG_01947	ATEG_04847	Q0CWI7	Q0CN87	Protein NPL4.	Uncharacterized protein.	0.998
ATEG_01947	ATEG_09861	Q0CWI7	Q0C8X3	Protein NPL4.	Uncharacterized protein.	0.628
ATEG_02933	ATEG_00595	Q0CTQ1	Q0D0D9	Uncharacterized protein.	Uncharacterized protein.	0.757
ATEG_02933	ATEG_01947	Q0CTQ1	Q0CWI7	Uncharacterized protein.	Protein NPL4.	0.534
ATEG_02933	ATEG_04847	Q0CTQ1	Q0CN87	Uncharacterized protein.	Uncharacterized protein.	0.578
ATEG_02933	ATEG_09861	Q0CTQ1	Q0C8X3	Uncharacterized protein.	Uncharacterized protein.	0.745
ATEG_04847	ATEG_00595	Q0CN87	Q0D0D9	Uncharacterized protein.	Uncharacterized protein.	0.451
ATEG_04847	ATEG_01947	Q0CN87	Q0CWI7	Uncharacterized protein.	Protein NPL4.	0.998
ATEG_04847	ATEG_02933	Q0CN87	Q0CTQ1	Uncharacterized protein.	Uncharacterized protein.	0.578
ATEG_04847	ATEG_09861	Q0CN87	Q0C8X3	Uncharacterized protein.	Uncharacterized protein.	0.578
ATEG_09861	ATEG_00595	Q0C8X3	Q0D0D9	Uncharacterized protein.	Uncharacterized protein.	0.973
ATEG_09861	ATEG_01947	Q0C8X3	Q0CWI7	Uncharacterized protein.	Protein NPL4.	0.628
ATEG_09861	ATEG_02933	Q0C8X3	Q0CTQ1	Uncharacterized protein.	Uncharacterized protein.	0.745
ATEG_09861	ATEG_04847	Q0C8X3	Q0CN87	Uncharacterized protein.	Uncharacterized protein.	0.578