6 items (Aspergillus terreus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ATEG_08628	Uncharacterized protein. (347 aa)
	ATEG_10038	Uncharacterized protein. (182 aa)
	ATEG_01744	Uncharacterized protein. (262 aa)
	ATEG_02122	HTH myb-type domain-containing protein. (840 aa)
	ATEG_06800	Uncharacterized protein. (436 aa)
	ATEG_08010	BRCT domain-containing protein. (1965 aa)

Your Current Organism:

Aspergillus terreus

NCBI taxonomy Id: 341663
Other names: A. terreus NIH2624, Aspergillus terreus FGSC A1156, Aspergillus terreus NIH2624

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATEG_01744	ATEG_06800	Q0CX40	Q0CHN4	Uncharacterized protein.	Uncharacterized protein.	0.729
ATEG_02122	ATEG_06800	Q0CW12	Q0CHN4	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.729
ATEG_06800	ATEG_01744	Q0CHN4	Q0CX40	Uncharacterized protein.	Uncharacterized protein.	0.729
ATEG_06800	ATEG_02122	Q0CHN4	Q0CW12	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.729
ATEG_06800	ATEG_08010	Q0CHN4	Q0CE74	Uncharacterized protein.	BRCT domain-containing protein.	0.729
ATEG_06800	ATEG_08628	Q0CHN4	Q0CCF6	Uncharacterized protein.	Uncharacterized protein.	0.729
ATEG_08010	ATEG_06800	Q0CE74	Q0CHN4	BRCT domain-containing protein.	Uncharacterized protein.	0.729
ATEG_08628	ATEG_06800	Q0CCF6	Q0CHN4	Uncharacterized protein.	Uncharacterized protein.	0.729