9 items (Aspergillus terreus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ATEG_02460	Uncharacterized protein. (446 aa)
	ATEG_07780	APH domain-containing protein. (403 aa)
	ATEG_07395	Uncharacterized protein. (470 aa)
	ATEG_04659	40S ribosomal protein S27a. (154 aa)
	ATEG_07142	APH domain-containing protein. (619 aa)
	ATEG_03774	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation. (101 aa)
	ATEG_03687	Uncharacterized protein. (143 aa)
	ATEG_03286	Uncharacterized protein. (436 aa)
	ATEG_06807	BZIP domain-containing protein. (276 aa)

Your Current Organism:

Aspergillus terreus

NCBI taxonomy Id: 341663
Other names: A. terreus NIH2624, Aspergillus terreus FGSC A1156, Aspergillus terreus NIH2624

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATEG_02460	ATEG_03286	Q0CV24	Q0CSP8	Uncharacterized protein.	Uncharacterized protein.	0.606
ATEG_02460	ATEG_03687	Q0CV24	Q0CRJ7	Uncharacterized protein.	Uncharacterized protein.	0.606
ATEG_02460	ATEG_03774	Q0CV24	Q0CRB0	Uncharacterized protein.	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation.	0.606
ATEG_02460	ATEG_04659	Q0CV24	Q0CNS5	Uncharacterized protein.	40S ribosomal protein S27a.	0.964
ATEG_02460	ATEG_06807	Q0CV24	Q0CHM7	Uncharacterized protein.	BZIP domain-containing protein.	0.964
ATEG_02460	ATEG_07142	Q0CV24	Q0CGQ0	Uncharacterized protein.	APH domain-containing protein.	0.606
ATEG_02460	ATEG_07395	Q0CV24	Q0CFZ7	Uncharacterized protein.	Uncharacterized protein.	0.606
ATEG_02460	ATEG_07780	Q0CV24	Q0CEV4	Uncharacterized protein.	APH domain-containing protein.	0.606
ATEG_03286	ATEG_02460	Q0CSP8	Q0CV24	Uncharacterized protein.	Uncharacterized protein.	0.606
ATEG_03687	ATEG_02460	Q0CRJ7	Q0CV24	Uncharacterized protein.	Uncharacterized protein.	0.606
ATEG_03774	ATEG_02460	Q0CRB0	Q0CV24	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation.	Uncharacterized protein.	0.606
ATEG_04659	ATEG_02460	Q0CNS5	Q0CV24	40S ribosomal protein S27a.	Uncharacterized protein.	0.964
ATEG_06807	ATEG_02460	Q0CHM7	Q0CV24	BZIP domain-containing protein.	Uncharacterized protein.	0.964
ATEG_07142	ATEG_02460	Q0CGQ0	Q0CV24	APH domain-containing protein.	Uncharacterized protein.	0.606
ATEG_07395	ATEG_02460	Q0CFZ7	Q0CV24	Uncharacterized protein.	Uncharacterized protein.	0.606
ATEG_07780	ATEG_02460	Q0CEV4	Q0CV24	APH domain-containing protein.	Uncharacterized protein.	0.606