Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ATEG_02027 | ATEG_02346 | Q0CWA7 | Q0CVD8 | Nudix hydrolase domain-containing protein. | RNase_PH domain-containing protein. | 0.684 |
| ATEG_02027 | ATEG_09292 | Q0CWA7 | Q0CAJ2 | Nudix hydrolase domain-containing protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.966 |
| ATEG_02027 | ATEG_10100 | Q0CWA7 | Q0C884 | Nudix hydrolase domain-containing protein. | Uncharacterized protein. | 0.745 |
| ATEG_02078 | tif35 | Q0CW56 | Q0CPF9 | Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. | Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. | 0.697 |
| ATEG_02163 | ATEG_02346 | Q0CVX1 | Q0CVD8 | Uncharacterized protein. | RNase_PH domain-containing protein. | 0.684 |
| ATEG_02163 | ATEG_09292 | Q0CVX1 | Q0CAJ2 | Uncharacterized protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.945 |
| ATEG_02163 | ATEG_10100 | Q0CVX1 | Q0C884 | Uncharacterized protein. | Uncharacterized protein. | 0.745 |
| ATEG_02346 | ATEG_02027 | Q0CVD8 | Q0CWA7 | RNase_PH domain-containing protein. | Nudix hydrolase domain-containing protein. | 0.684 |
| ATEG_02346 | ATEG_02163 | Q0CVD8 | Q0CVX1 | RNase_PH domain-containing protein. | Uncharacterized protein. | 0.684 |
| ATEG_02346 | ATEG_05200 | Q0CVD8 | Q0CM84 | RNase_PH domain-containing protein. | Uncharacterized protein. | 0.680 |
| ATEG_02346 | ATEG_09292 | Q0CVD8 | Q0CAJ2 | RNase_PH domain-containing protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.797 |
| ATEG_02346 | ATEG_10100 | Q0CVD8 | Q0C884 | RNase_PH domain-containing protein. | Uncharacterized protein. | 0.651 |
| ATEG_04659 | ATEG_09292 | Q0CNS5 | Q0CAJ2 | 40S ribosomal protein S27a. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.716 |
| ATEG_04659 | tif35 | Q0CNS5 | Q0CPF9 | 40S ribosomal protein S27a. | Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. | 0.878 |
| ATEG_05200 | ATEG_02346 | Q0CM84 | Q0CVD8 | Uncharacterized protein. | RNase_PH domain-containing protein. | 0.680 |
| ATEG_05200 | ATEG_06011 | Q0CM84 | Q0CJX3 | Uncharacterized protein. | Uncharacterized protein. | 0.440 |
| ATEG_05200 | ATEG_09292 | Q0CM84 | Q0CAJ2 | Uncharacterized protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.685 |
| ATEG_06011 | ATEG_05200 | Q0CJX3 | Q0CM84 | Uncharacterized protein. | Uncharacterized protein. | 0.440 |
| ATEG_06807 | ATEG_09292 | Q0CHM7 | Q0CAJ2 | BZIP domain-containing protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.716 |
| ATEG_06807 | tif35 | Q0CHM7 | Q0CPF9 | BZIP domain-containing protein. | Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. | 0.878 |
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