10 items (Aspergillus terreus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ATEG_08777	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (608 aa)
	ATEG_00851	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	ATEG_04659	40S ribosomal protein S27a. (154 aa)
	ATEG_00696	Uncharacterized protein. (517 aa)
	ATEG_04201	Uncharacterized protein. (290 aa)
	ATEG_07174	Abhydrolase_2 domain-containing protein. (182 aa)
	ATEG_06959	Uncharacterized protein. (257 aa)
	ATEG_06807	BZIP domain-containing protein. (276 aa)
	ATEG_05421	Uncharacterized protein. (350 aa)
	ATEG_01139	Abhydrolase_2 domain-containing protein. (284 aa)

Your Current Organism:

Aspergillus terreus

NCBI taxonomy Id: 341663
Other names: A. terreus NIH2624, Aspergillus terreus FGSC A1156, Aspergillus terreus NIH2624

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATEG_00696	ATEG_05421	Q0D038	Q0CLL3	Uncharacterized protein.	Uncharacterized protein.	0.999
ATEG_00696	ATEG_06959	Q0D038	Q0CH83	Uncharacterized protein.	Uncharacterized protein.	0.863
ATEG_04201	ATEG_07174	Q0CQ33	Q0CGL8	Uncharacterized protein.	Abhydrolase_2 domain-containing protein.	0.551
ATEG_05421	ATEG_00696	Q0CLL3	Q0D038	Uncharacterized protein.	Uncharacterized protein.	0.999
ATEG_05421	ATEG_06959	Q0CLL3	Q0CH83	Uncharacterized protein.	Uncharacterized protein.	0.836
ATEG_06959	ATEG_00696	Q0CH83	Q0D038	Uncharacterized protein.	Uncharacterized protein.	0.863
ATEG_06959	ATEG_05421	Q0CH83	Q0CLL3	Uncharacterized protein.	Uncharacterized protein.	0.836
ATEG_07174	ATEG_04201	Q0CGL8	Q0CQ33	Abhydrolase_2 domain-containing protein.	Uncharacterized protein.	0.551