(7 nodes) Acyl transferase domain network (Mycolicibacter arupensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ORA00821.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (991 aa)
	ORA00476.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1010 aa)
	OQZ97489.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2165 aa)
	OQZ96842.1	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
	OQZ95414.1	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3078 aa)
	OQZ95311.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2103 aa)
	OQZ91082.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (974 aa)

Your Current Organism:

Mycolicibacter arupensis

NCBI taxonomy Id: 342002
Other names: DSM 44942, M. arupensis, Mycobacterium arupense, Mycobacterium arupense Cloud et al. 2006, Mycolicibacter arupensis (Cloud et al. 2006) Gupta et al. 2018, strain AR30097

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OQZ91082.1	OQZ95311.1	BST15_20275	BST15_14580	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
OQZ91082.1	OQZ95414.1	BST15_20275	BST15_14255	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
OQZ91082.1	OQZ97489.1	BST15_20275	BST15_10170	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
OQZ91082.1	ORA00476.1	BST15_20275	BST15_04555	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
OQZ91082.1	ORA00821.1	BST15_20275	BST15_01585	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
OQZ95311.1	OQZ91082.1	BST15_14580	BST15_20275	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
OQZ95311.1	OQZ95414.1	BST15_14580	BST15_14255	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OQZ95311.1	OQZ96842.1	BST15_14580	BST15_11865	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OQZ95311.1	OQZ97489.1	BST15_14580	BST15_10170	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
OQZ95311.1	ORA00476.1	BST15_14580	BST15_04555	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
OQZ95311.1	ORA00821.1	BST15_14580	BST15_01585	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OQZ95414.1	OQZ91082.1	BST15_14255	BST15_20275	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
OQZ95414.1	OQZ95311.1	BST15_14255	BST15_14580	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OQZ95414.1	OQZ96842.1	BST15_14255	BST15_11865	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
OQZ95414.1	OQZ97489.1	BST15_14255	BST15_10170	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OQZ95414.1	ORA00476.1	BST15_14255	BST15_04555	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
OQZ95414.1	ORA00821.1	BST15_14255	BST15_01585	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OQZ96842.1	OQZ95311.1	BST15_11865	BST15_14580	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OQZ96842.1	OQZ95414.1	BST15_11865	BST15_14255	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
OQZ96842.1	OQZ97489.1	BST15_11865	BST15_10170	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984

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