STRINGSTRING
VE01_02247 VE01_02247 PKC1_1 PKC1_1 SEC1 SEC1 PKC1_2 PKC1_2 SSO2 SSO2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VE01_02247t-SNARE coiled-coil homology domain-containing protein. (331 aa)
PKC1_1Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1165 aa)
SEC1Vacuolar sorting protein VPS33/slp1; Belongs to the STXBP/unc-18/SEC1 family. (729 aa)
PKC1_2Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (394 aa)
SSO2Syntaxin. (382 aa)
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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