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RPB8 RPB8 RPB5 RPB5 VE01_07461 VE01_07461 CTK2 CTK2 RPB3 RPB3 HTB1 HTB1 TOA2_2 TOA2_2 VE01_07163 VE01_07163 NCP1_3 NCP1_3 RPB1 RPB1 SPT15 SPT15 VE01_00131 VE01_00131 VE01_08622 VE01_08622 VE01_09059 VE01_09059 CBF1 CBF1 VE01_09666 VE01_09666 GCN5 GCN5 RPB4 RPB4 PKH3 PKH3 VE01_10552 VE01_10552 RPC10 RPC10 RPB10 RPB10 TOA1 TOA1 DBP2 DBP2 RPB2 RPB2 RPB6 RPB6 CIR1 CIR1 PKC1_1 PKC1_1 cprA cprA VE01_01460 VE01_01460 TOA2_1 TOA2_1 VE01_01598 VE01_01598 HSP90 HSP90 ESA1 ESA1 VE01_02032 VE01_02032 FKH2 FKH2 VE01_02001 VE01_02001 RPB9 RPB9 VE01_03485 VE01_03485 VE01_03029 VE01_03029 RPB11 RPB11 RPB7 RPB7 VE01_03723 VE01_03723 VE01_04978 VE01_04978 VE01_04289 VE01_04289 BUR1 BUR1 PPT1 PPT1 NCP1_2 NCP1_2 RMT1_2 RMT1_2 VE01_05819 VE01_05819 VE01_06881 VE01_06881 PKC1_2 PKC1_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB8DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (151 aa)
RPB5DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5). (236 aa)
VE01_07461GATA-type domain-containing protein. (293 aa)
CTK2RNA polymerase II C-terminal domain kinase beta subunit; Belongs to the cyclin family. (441 aa)
RPB345 kDa subunit of RNA polymerase II. (342 aa)
HTB1Histone H2B; Belongs to the histone H2B family. (137 aa)
TOA2_2Transcription initiation factor IIA small chain (TFIIA 13.5 kDa subunit). (161 aa)
VE01_07163Uncharacterized protein. (402 aa)
NCP1_3NADPH-cytochrome P450 reductase. (128 aa)
RPB1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1728 aa)
SPT15TATA-binding protein. (258 aa)
VE01_00131Uncharacterized protein; Belongs to the cyclin family. (428 aa)
VE01_08622Uncharacterized protein. (371 aa)
VE01_09059Uncharacterized protein. (371 aa)
CBF1Basic helix-loop-helix protein. (304 aa)
VE01_09666Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (726 aa)
GCN5Histone acetyltransferase. (400 aa)
RPB4RNA polymerase B. (149 aa)
PKH3Pkb-activating kinase-like protein. (942 aa)
VE01_10552GATA-type domain-containing protein. (1007 aa)
RPC10DNA-directed RNA polymerase core subunit rpc10. (77 aa)
RPB10DNA-directed RNA Polymerase II subunit L. (76 aa)
TOA1Transcription factor IIA subunit alpha. (453 aa)
DBP2ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (569 aa)
RPB2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1272 aa)
RPB6DNA-directed RNA polymerases I II and III subunit RPABC2. (163 aa)
CIR1Electron transfer flavoprotein subunit. (560 aa)
PKC1_1Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1165 aa)
cprANADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (693 aa)
VE01_01460Uncharacterized protein. (349 aa)
TOA2_1Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
VE01_01598Uncharacterized protein. (274 aa)
HSP90Heat shock protein 90. (703 aa)
ESA1Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (512 aa)
VE01_02032Flavin_Reduct domain-containing protein. (278 aa)
FKH2Transcription factor. (691 aa)
VE01_02001Protein kinase domain-containing protein. (241 aa)
RPB9DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
VE01_03485Uncharacterized protein. (1141 aa)
VE01_03029Uncharacterized protein. (807 aa)
RPB11DNA-directed RNA polymerase II core subunit. (188 aa)
RPB7DNA-directed RNA polymerase II subunit. (171 aa)
VE01_03723Uncharacterized protein. (649 aa)
VE01_04978Pectate_lyase_3 domain-containing protein. (1496 aa)
VE01_04289Fork-head domain-containing protein. (764 aa)
BUR1Serine/threonine protein kinase, CMGC, CDC2/CDK sub. (609 aa)
PPT1Serine/threonine-protein phosphatase. (477 aa)
NCP1_2NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450. (690 aa)
RMT1_2Type I protein arginine N-methyltransferase Rmt1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (335 aa)
VE01_05819Uncharacterized protein. (381 aa)
VE01_06881Uncharacterized protein. (1089 aa)
PKC1_2Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (394 aa)
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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