STRINGSTRING
GCA_000805695_00495 GCA_000805695_00495 thlA thlA echA8_2 echA8_2 paaH paaH pcaF_2 pcaF_2 boxD boxD pksH pksH EGI89_08280 EGI89_08280 echA8_1 echA8_1 EGI89_05445 EGI89_05445 scoB scoB scoA scoA yngG yngG EGI89_11265 EGI89_11265 pcaF_1 pcaF_1 EGI89_11280 EGI89_11280 fadB2 fadB2 etfB etfB etfA etfA GCA_000805695_03472 GCA_000805695_03472
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000805695_00495Unannotated protein. (379 aa)
thlAUnannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
echA8_2Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
paaHUnannotated protein. (385 aa)
pcaF_2Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
boxDUnannotated protein. (683 aa)
pksHUnannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. (251 aa)
EGI89_08280Unannotated protein. (388 aa)
echA8_1Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
EGI89_05445Unannotated protein. (380 aa)
scoBUnannotated protein. (218 aa)
scoAUnannotated protein. (256 aa)
yngGUnannotated protein. (288 aa)
EGI89_11265Unannotated protein. (799 aa)
pcaF_1Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
EGI89_11280Unannotated protein. (600 aa)
fadB2Unannotated protein. (296 aa)
etfBUnannotated protein. (248 aa)
etfAUnannotated protein. (318 aa)
GCA_000805695_03472Unannotated protein. (452 aa)
Your Current Organism:
Empedobacter falsenii
NCBI taxonomy Id: 343874
Other names: CCUG 51536, CIP 108861, E. falsenii, Empedobacter falsenii (Kampfer et al. 2006) Zhang et al. 2014, Wautersiella falsenii, Wautersiella falsenii (Kampfer et al. 2006) emend. Zhang et al. 2014, strain NF 993
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