STRINGSTRING
ACD10249.1 ACD10249.1 ACD08431.1 ACD08431.1 ACD09292.1 ACD09292.1 ACD07007.1 ACD07007.1 ACD08167.1 ACD08167.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACD10249.1Conserved hypothetical protein; ydhT; identified by similarity to SP:P77147. (270 aa)
ACD08431.1Nickel-dependent hydrogenase, b-type cytochrome subunit; Identified by match to protein family HMM PF01292. (261 aa)
ACD09292.1Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037. (239 aa)
ACD07007.1Conserved hypothetical protein. (215 aa)
ACD08167.1Aldehyde ferredoxin oxidoreductase; Identified by match to protein family HMM PF01314. (548 aa)
Your Current Organism:
Shigella boydii
NCBI taxonomy Id: 344609
Other names: S. boydii CDC 3083-94, Shigella boydii BS512, Shigella boydii CDC 3083-94, Shigella boydii str. CDC 3083-94, Shigella boydii strain CDC 3083-94
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