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| | tal2 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (317 aa) |
| | araD | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). (231 aa) |
| | araA | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (500 aa) |
| | araB | L-ribulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01234. (566 aa) |
| | ACD09940.1 | PTS system IIA component domain protein; Identified by match to protein family HMM PF03610. (146 aa) |
| | ACD07842.1 | ROK family protein; Identified by match to protein family HMM PF00480. (261 aa) |
| | ACD07831.1 | ROK family protein. (49 aa) |
| | cof | Hydrolase Cof; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P). (272 aa) |
| | pgm | Phosphoglucomutase, alpha-D-glucose phosphate-specific; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01132. (546 aa) |
| | nagE | PTS system, N-acetylglucosamine-specific IICBA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00830; match to protein family HMM TIGR00852; match to protein family HMM TIGR01998. (648 aa) |
| | nagB | Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. (266 aa) |
| | nagA2 | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. (382 aa) |
| | nagC | N-acetylglucosamine repressor; Identified by match to protein family HMM PF00480. (406 aa) |
| | nagD | nagD protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. (250 aa) |
| | ACD08832.1 | PTS system, fructose-specific II ABC component; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. (638 aa) |
| | gpmA | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (250 aa) |
| | ybhA | Phosphatase YbhA; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. (272 aa) |
| | fruB | PTS system fructose-specific phosphotransferase enzyme IIA component; Identified by match to protein family HMM PF00359; match to protein family HMM PF00381; match to protein family HMM TIGR01003. (376 aa) |
| | fruK | 1-phosphofructokinase; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; Belongs to the carbohydrate kinase PfkB family. (312 aa) |
| | fruA | PTS system, fructose-specific, IIBC component; Identified by match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR01427. (563 aa) |
| | mtfA | Mlc titration factor MtfA; Involved in the regulation of ptsG expression by binding and inactivating Mlc. (265 aa) |
| | ACD07089.1 | IS911, transposase orfA; Identified by match to protein family HMM PF01527. (100 aa) |
| | otsA | Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Identified by match to protein family HMM PF00982. (298 aa) |
| | otsB | Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (265 aa) |
| | amyA | Alpha-amylase, cytoplasmic; Identified by match to protein family HMM PF00128. (495 aa) |
| | fbaB | Fructose-bisphosphate aldolase, class 1; Identified by match to protein family HMM PF01791. (350 aa) |
| | gatY | Class II aldolase, tagatose bisphosphate family; Catalytic subunit of the tagatose-1,6-bisphosphate aldolase GatYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6-bisphosphate (TBP). Requires GatZ subunit for full activity and stability. Is involved in the catabolism of galactitol. (284 aa) |
| | gatZ | Putative tagatose-6-phosphate kinase; Component of the tagatose-1,6-bisphosphate aldolase GatYZ that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of GatY. When expressed alone, GatZ does not show any aldolase activity. Is involved in the catabolism of galactitol. (420 aa) |
| | gatA | PTS system, galactitol-specific IIB component; Identified by match to protein family HMM PF00359. (150 aa) |
| | gatB | PTS system, galactitol-specific IIB component; Identified by match to protein family HMM PF02302. (94 aa) |
| | gatC | PTS system, galactitol-specific IIC component; Identified by match to protein family HMM PF03611; match to protein family HMM TIGR00827. (451 aa) |
| | gatD | Galactitol-1-phosphate 5-dehydrogenase; Identified by similarity to SP:P0A9S3; match to protein family HMM PF00107; match to protein family HMM PF08240. (346 aa) |
| | gatR | Galactitol utilization operon repressor; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220. (257 aa) |
| | gnd | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (468 aa) |
| | dhaM | PTS-dependent dihydroxyacetone kinase, DhaM subunit; Identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR02364; Belongs to the PEP-utilizing enzyme family. (472 aa) |
| | dhaL | PTS-dependent dihydroxyacetone kinase, DhaL subunit; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR02365. (210 aa) |
| | dhaK | PTS-dependent dihydroxyacetone kinase, DhaK subunit; Identified by match to protein family HMM PF02733; match to protein family HMM TIGR02363. (369 aa) |
| | dhaR | PTS-dependent dihydroxyacetone kinase operon regulatory protein, DhaR; Identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02954. (639 aa) |
| | ACD09450.1 | IS911, transposase orfA; Identified by match to protein family HMM PF01527. (100 aa) |
| | prs | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (315 aa) |
| | ACD09851.1 | Osmotically inducible lipoprotein B. (72 aa) |
| | ACD09420.1 | Transcriptional regulator, DeoR family; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279. (249 aa) |
| | yciZ | Conserved hypothetical protein; Belongs to the UPF0509 family. (60 aa) |
| | ACD08041.1 | IS1 transposase orfB; Identified by match to protein family HMM PF03400. (167 aa) |
| | ACD06294.1 | Transposase. (60 aa) |
| | ACD09179.1 | Putative sucrose phosphorylase. (141 aa) |
| | gap | Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF02800. (217 aa) |
| | ACD09274.1 | Hypothetical protein; Identified by glimmer; putative. (37 aa) |
| | ACD07519.1 | IS66 family element, transposase; Identified by match to protein family HMM PF03050. (512 aa) |
| | ACD07785.1 | IS66 family element, orf2; Identified by match to protein family HMM PF05717. (115 aa) |
| | mic | Transcriptional regulator Mic; Identified by match to protein family HMM PF00480. (406 aa) |
| | manA | Mannose-6-phosphate isomerase, class I; Identified by similarity to SP:P00946; match to protein family HMM PF01238; match to protein family HMM TIGR00218; Belongs to the mannose-6-phosphate isomerase type 1 family. (391 aa) |
| | malX | PTS system, maltose and glucose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00852; match to protein family HMM TIGR02004. (530 aa) |
| | pfkB | 6-phosphofructokinase; Identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; Belongs to the carbohydrate kinase PfkB family. (309 aa) |
| | ACD07503.1 | HAD-superfamily hydrolase, subfamily IA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509. (222 aa) |
| | ACD08369.1 | N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIAcomponent; Identified by match to protein family HMM PF02255. (83 aa) |
| | ACD08148.1 | N,N'-diacetylchitobiose permease IIC component; Identified by match to protein family HMM TIGR00410. (253 aa) |
| | chbB | PTS system, N,N'-diacetylchitobiose-specific IIB component; Identified by match to protein family HMM PF02302; match to protein family HMM TIGR00853. (106 aa) |
| | gapA | gIyceraldehyde-3-phosphate dehydrogenase (phosphorylating); Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (331 aa) |
| | ACD06864.1 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. (301 aa) |
| | manX | PTS system, mannose-specific IIAB component; Identified by match to protein family HMM PF03610; match to protein family HMM PF03830; match to protein family HMM TIGR00824; match to protein family HMM TIGR00854. (323 aa) |
| | manY | PTS system, mannose-specific IIC component; Identified by match to protein family HMM PF03609; match to protein family HMM TIGR00822. (266 aa) |
| | manZ | PTS system, mannose-specific IID component; Identified by match to protein family HMM PF03613; match to protein family HMM TIGR00828. (283 aa) |
| | eda | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182. (213 aa) |
| | edd | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (603 aa) |
| | zwf | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (491 aa) |
| | ACD09464.1 | Conserved hypothetical protein. (49 aa) |
| | ACD10090.1 | Transcriptional regulator, rpiR family; Identified by match to protein family HMM PF01380; match to protein family HMM PF01418. (289 aa) |
| | ptsG | PTS system, glucose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00852; match to protein family HMM TIGR02002. (477 aa) |
| | plsX | Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (356 aa) |
| | aqpZ | Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. (231 aa) |
| | deoR | Deoxyribose operon repressor; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220. (252 aa) |
| | fsaA | Fructose-6-phosphate aldolase 1; Catalyzes the reversible formation of fructose 6-phosphate from dihydroxyacetone and D-glyceraldehyde 3-phosphate via an aldolization reaction; Belongs to the transaldolase family. Type 3A subfamily. (220 aa) |
| | supH | Sugar phosphatase SupH; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. (271 aa) |
| | ACD08685.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF07350. (421 aa) |
| | pgl | 6-phosphogluconolactonase; Catalyzes the hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate. (331 aa) |
| | glpQ | Glycerophosphoryl diester phosphodiesterase GlpQ; Identified by match to protein family HMM PF03009. (358 aa) |
| | glpT | Glycerol-3-phosphate transporter; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00712; match to protein family HMM TIGR00881. (452 aa) |
| | glpA | Anaerobic glycerol-3-phosphate dehydrogenase subunit, A; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324; match to protein family HMM TIGR03377; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (542 aa) |
| | glpB | Anaerobic glycerol-3-phosphate dehydrogenase, subunit B; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor. (419 aa) |
| | glpC | Sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit; Identified by match to protein family HMM PF02754; match to protein family HMM TIGR03379. (396 aa) |
| | ACD07283.1 | Hypothetical protein; Identified by glimmer; putative. (41 aa) |
| | ACD07742.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF04754; match to protein family HMM TIGR01784. (300 aa) |
| | yfbT | Sugar-phosphatase, YfbT; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. (216 aa) |
| | ypdF | Aminopeptidase YpdF; Identified by similarity to SP:P76524; match to protein family HMM PF00557; match to protein family HMM PF01321. (361 aa) |
| | fryC | PTS system, fructose-like, IIC component; Identified by match to protein family HMM PF02378; match to protein family HMM TIGR01427. (415 aa) |
| | ACD08976.1 | PTS system, Fructose specific IIB subunit; Identified by match to protein family HMM PF02379; match to protein family HMM TIGR00829. (108 aa) |
| | glk | Glucokinase; Identified by match to protein family HMM PF02685; match to protein family HMM TIGR00749; Belongs to the bacterial glucokinase family. (321 aa) |
| | ACD07621.1 | Conserved hypothetical protein. (108 aa) |
| | crr | PTS system, glucose-specific IIA component; Identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830. (169 aa) |
| | ptsI | Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (575 aa) |
| | ptsH | Phosphocarrier protein PtsH; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. (85 aa) |
| | ucpA | Oxidoreductase UcpA; Identified by similarity to SP:P37440; match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659. (263 aa) |
| | murR | Transcriptional regulator, RpiR family; Represses the expression of the murPQ operon involved in the uptake and degradation of N-acetylmuramic acid (MurNAc). Binds to two adjacent inverted repeats within the operator region. MurNAc 6- phosphate, the substrate of MurQ, is the specific inducer that weakens binding of MurR to the operator. (285 aa) |
| | murQ | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily. (298 aa) |
| | murP | PTS system, N-acetylmuramic acid-specific EIIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378. (474 aa) |
| | tal1 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (316 aa) |
| | tkt | Transketolase; Identified by match to protein family HMM PF00456. (388 aa) |
| | ACD07160.1 | Transcriptional regulator, RpiR family; Identified by match to protein family HMM PF01380; match to protein family HMM PF01418. (282 aa) |
| | ACD08234.1 | Identified by match to protein family HMM PF00583; match to protein family HMM PF02629. (886 aa) |
| | ACD07801.1 | DTW domain protein; Identified by match to protein family HMM PF03942. (232 aa) |
| | ACD07153.1 | Putative thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family. (139 aa) |
| | eno | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (432 aa) |
| | ACD06908.1 | Transcriptional regulator, DeoR family; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279. (255 aa) |
| | ascB | 6-phospho-beta-glucosidase; Identified by match to protein family HMM PF00232; Belongs to the glycosyl hydrolase 1 family. (474 aa) |
| | srlR | Glucitol operon repressor; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279. (257 aa) |
| | gutM | Glucitol operon activator protein; Identified by match to protein family HMM PF06923. (119 aa) |
| | srlD | Sorbitol-6-phosphate 2-dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (259 aa) |
| | srlB | PTS system, glucitol/sorbitol-specific, IIA component; Identified by match to protein family HMM PF03829; match to protein family HMM TIGR00849. (123 aa) |
| | srlE | PTS system, glucitol/sorbitol-specific, IIB component; Identified by match to protein family HMM PF03612; match to protein family HMM PF07663; match to protein family HMM TIGR00825. (319 aa) |
| | srlA | PTS system, glucitol/sorbitol-specific, IIC component; Identified by match to protein family HMM PF03608; match to protein family HMM TIGR00821. (187 aa) |
| | bglA | 6-phospho-beta-glucosidase BglA; Identified by match to protein family HMM PF00232; Belongs to the glycosyl hydrolase 1 family. (479 aa) |
| | rpiA | Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (219 aa) |
| | fbaA | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (359 aa) |
| | pgk | Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family. (387 aa) |
| | cmtA | PTS system, mannitol-specific cryptic EIICB component; Identified by similarity to SP:P69826; match to protein family HMM PF02302; match to protein family HMM PF02378; match to protein family HMM TIGR00851. (462 aa) |
| | cmtB | Mannitol-specific cryptic phosphotransferase enzyme IIA component; Identified by match to protein family HMM PF00359. (147 aa) |
| | tktA | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (663 aa) |
| | plsC | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (245 aa) |
| | plsY | Conserved hypothetical protein; Catalyzes the transfer of an acyl group from acyl-ACP to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme can also utilize acyl-CoA as fatty acyl donor, but not acyl- PO(4); Belongs to the PlsY family. (205 aa) |
| | nanA | N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. (297 aa) |
| | nanT1 | MFS transporter, sialate:H+ symporter (SHS) family; Catalyzes the proton-dependent transport of sialic acid. Belongs to the major facilitator superfamily. Sialate:H(+) symporter (SHS) (TC 2.A.1.12) family. (496 aa) |
| | nanE | Putative N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). (229 aa) |
| | nanK | ROK family protein; Catalyzes the phosphorylation of N-acetylmannosamine (ManNAc) to ManNAc-6-P; Belongs to the ROK (NagC/XylR) family. NanK subfamily. (291 aa) |
| | ACD08425.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF04074; match to protein family HMM TIGR00022. (154 aa) |
| | ACD06766.1 | Tagatose-1,6-bisphosphate aldolase GatY; Identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01858. (284 aa) |
| | ACD08132.1 | DeoR-family regulatory protein; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279. (271 aa) |
| | ACD07170.1 | Conserved hypothetical protein. (361 aa) |
| | ACD06560.1 | IS4 transposase; Identified by match to protein family HMM PF01609. (448 aa) |
| | ACD10342.1 | Conserved hypothetical protein. (117 aa) |
| | ACD09618.1 | Identified by match to protein family HMM PF02126. (292 aa) |
| | ACD09368.1 | Metalloenzyme domain protein; Identified by match to protein family HMM PF01676; match to protein family HMM PF08342. (408 aa) |
| | ACD08689.1 | Alanine racemase family; Identified by match to protein family HMM PF01168. (387 aa) |
| | ACD08144.1 | Conserved hypothetical protein. (120 aa) |
| | ACD07596.1 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SF3196. (301 aa) |
| | trpS | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (334 aa) |
| | gph | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (252 aa) |
| | rpe | Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family. (225 aa) |
| | dam | DNA adenine methylase; Identified by match to protein family HMM PF02086; match to protein family HMM TIGR00571. (278 aa) |
| | malQ | 4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217. (694 aa) |
| | malP | Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (797 aa) |
| | glpR | Glycerol-3-phosphate regulon repressor; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279. (252 aa) |
| | glpG | Peptidase, S54 (rhomboid) family; Rhomboid-type serine protease that catalyzes intramembrane proteolysis. (276 aa) |
| | glpD | Glycerol-3-phosphate dehydrogenase; Identified by match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (501 aa) |
| | gntK | Thermoresistant gluconokinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. (175 aa) |
| | glgB | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (728 aa) |
| | glgX | Glycogen debranching enzyme GlgX; Removes maltotriose and maltotetraose chains that are attached by 1,6-alpha-linkage to the limit dextrin main chain, generating a debranched limit dextrin. (657 aa) |
| | glgC | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc. (431 aa) |
| | glgA | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (477 aa) |
| | glgP | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (815 aa) |
| | ACD09058.1 | IS4 ORF. (103 aa) |
| | treF | Cytoplasmic trehalase TreF; Hydrolyzes trehalose to glucose. Could be involved, in cells returning to low osmolarity conditions, in the utilization of the accumulated cytoplasmic trehalose, which was synthesized in response to high osmolarity. (549 aa) |
| | kdgK | 2-dehydro-3-deoxygluconokinase; Identified by match to protein family HMM PF00294. (309 aa) |
| | malS | Alpha-amylase, periplasmic; Identified by match to protein family HMM PF00128. (676 aa) |
| | mtlA | PTS system, mannitol-specific IIABC component; Identified by match to protein family HMM PF00359; match to protein family HMM PF02302; match to protein family HMM PF02378; match to protein family HMM TIGR00851. (637 aa) |
| | mtlD | Mannitol-1-phosphate 5-dehydrogenase; Identified by match to protein family HMM PF01232; match to protein family HMM PF08125. (382 aa) |
| | gpsA | NAD-dependent glycerol-3-phosphate dehydrogenase; Identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF07479; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (339 aa) |
| | gpmI | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (514 aa) |
| | rbsK | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (309 aa) |
| | ACD06915.1 | Phosphatase yidA. (109 aa) |
| | ACD06759.1 | PTS system, alpha-glucoside-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR02005. (582 aa) |
| | ivbL | IlvB leader peptide; Identified by similarity to SP:P03061; match to protein family HMM PF08049. (32 aa) |
| | uhpA | Transcriptional regulatory protein UhpA; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. (196 aa) |
| | uhpB | Sensor histidine kinase UhpB; Identified by match to protein family HMM PF02518; match to protein family HMM PF05231; match to protein family HMM PF07730. (497 aa) |
| | uhpC | Regulatory protein UhpC; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00881. (439 aa) |
| | uhpT | Hexose phosphate transport protein; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00881. (463 aa) |
| | ACD07048.1 | Deoxyribose-phosphate aldolase; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family. (295 aa) |
| | ACD09554.1 | Transposase. (147 aa) |
| | pfkA | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (320 aa) |
| | tpiA | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (255 aa) |
| | glpX1 | Fructose-1,6-bisphosphatase, class II; Identified by match to protein family HMM PF03320; match to protein family HMM TIGR00330. (336 aa) |
| | glpK | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. (502 aa) |
| | glpF | Glycerol uptake facilitator protein; Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family. (281 aa) |
| | ptsA | Multi-phosphoryl transfer protein 2; Identified by match to protein family HMM PF00359; match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417. (833 aa) |
| | ACD08577.1 | PTS system, mannose/fructose/sorbose family, IID component; Identified by match to protein family HMM PF03613; match to protein family HMM TIGR00828. (384 aa) |
| | ACD10418.1 | Sorbose-permease PTS system IIC component; Identified by match to protein family HMM PF03609; match to protein family HMM TIGR00822. (269 aa) |
| | ACD08271.1 | PTS system, mannose/fructose/sorbose family, IIA component; Identified by match to protein family HMM PF03610; match to protein family HMM TIGR00824. (135 aa) |
| | ACD07699.1 | Sorbitol-6-phosphate 2-dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (268 aa) |
| | sorC | Sorbitol operon regulator SorC; Identified by match to protein family HMM PF04198. (315 aa) |
| | pgi | Glucose-6-phosphate isomerase; Identified by match to protein family HMM PF00342; Belongs to the GPI family. (549 aa) |
| | dgkA | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (122 aa) |
| | plsB | Glycerol-3-phosphate acyltransferase; Identified by match to protein family HMM PF01553; Belongs to the GPAT/DAPAT family. (807 aa) |
| | ulaR | Transcriptional regulator UlaR; Represses ulaG and the ulaABCDEF operon. (251 aa) |
| | ulaG | Putative L-ascorbate-6-phosphate lactonase ulaG; Probably catalyzes the hydrolysis of L-ascorbate-6-P into 3- keto-L-gulonate-6-P. Is essential for L-ascorbate utilization under anaerobic conditions; Belongs to the UlaG family. (354 aa) |
| | ulaB | Ascorbate-specific phosphotransferase enzyme IIB component; Identified by match to protein family HMM PF02302. (101 aa) |
| | ulaC | Ascorbate-specific phosphotransferase enzyme IIA component; Identified by match to protein family HMM PF00359. (154 aa) |
| | ulaD | Orotidine 5'-phosphate decarboxylase / HUMPS family; Catalyzes the decarboxylation of 3-keto-L-gulonate-6-P into L-xylulose-5-P. Is involved in the anaerobic L-ascorbate utilization. Belongs to the HPS/KGPDC family. KGPDC subfamily. (216 aa) |
| | ulaE | L-ribulose-5-phosphate 3-epimerase; Catalyzes the isomerization of L-xylulose-5-phosphate to L- ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization; Belongs to the L-ribulose-5-phosphate 3-epimerase family. (284 aa) |
| | ulaF | L-ribulose-5-phosphate 4-epimerase; Catalyzes the isomerization of L-ribulose 5-phosphate to D- xylulose 5-phosphate. Is involved in the anaerobic L-ascorbate utilization. (228 aa) |
| | ACD08650.1 | Inner membrane protein YagU; Identified by match to protein family HMM PF07274. (183 aa) |
| | treB | PTS system, trehalose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00852; match to protein family HMM TIGR01992. (472 aa) |
| | treC | Alpha,alpha-phosphotrehalase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02403. (551 aa) |
| | fbp | Fructose-1,6-bisphosphatase; Identified by similarity to SP:P0A993; match to protein family HMM PF00316. (332 aa) |
| | deoC | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily. (259 aa) |
| | deoA | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. (440 aa) |
| | deoB | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (407 aa) |
| | gpmB | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. GpmB subfamily. (215 aa) |
