Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACD06864.1 | deoC | SbBS512_E2028 | SbBS512_E4928 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily. | 0.800 |
| ACD06864.1 | fbaA | SbBS512_E2028 | SbBS512_E3350 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.801 |
| ACD06864.1 | fbaB | SbBS512_E2028 | SbBS512_E1141 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Fructose-bisphosphate aldolase, class 1; Identified by match to protein family HMM PF01791. | 0.800 |
| ACD06864.1 | gapA | SbBS512_E2028 | SbBS512_E2026 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | gIyceraldehyde-3-phosphate dehydrogenase (phosphorylating); Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.568 |
| ACD06864.1 | glk | SbBS512_E2028 | SbBS512_E2757 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Glucokinase; Identified by match to protein family HMM PF02685; match to protein family HMM TIGR00749; Belongs to the bacterial glucokinase family. | 0.909 |
| ACD06864.1 | pgi | SbBS512_E2028 | SbBS512_E4530 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Glucose-6-phosphate isomerase; Identified by match to protein family HMM PF00342; Belongs to the GPI family. | 0.912 |
| ACD06864.1 | pgm | SbBS512_E2028 | SbBS512_E0562 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Phosphoglucomutase, alpha-D-glucose phosphate-specific; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01132. | 0.916 |
| ACD06864.1 | ptsG | SbBS512_E2028 | SbBS512_E2223 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | PTS system, glucose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00852; match to protein family HMM TIGR02002. | 0.900 |
| ACD06864.1 | tal1 | SbBS512_E2028 | SbBS512_E2830 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.801 |
| ACD06864.1 | tal2 | SbBS512_E2028 | SbBS512_E0008 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.825 |
| ACD06864.1 | tkt | SbBS512_E2028 | SbBS512_E2831 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Transketolase; Identified by match to protein family HMM PF00456. | 0.803 |
| ACD06864.1 | tktA | SbBS512_E2028 | SbBS512_E3367 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.803 |
| ACD06864.1 | zwf | SbBS512_E2028 | SbBS512_E2127 | Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.829 |
| deoA | deoB | SbBS512_E4929 | SbBS512_E4930 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.987 |
| deoA | deoC | SbBS512_E4929 | SbBS512_E4928 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily. | 0.978 |
| deoB | deoA | SbBS512_E4930 | SbBS512_E4929 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.987 |
| deoB | deoC | SbBS512_E4930 | SbBS512_E4928 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily. | 0.992 |
| deoB | pgm | SbBS512_E4930 | SbBS512_E0562 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Phosphoglucomutase, alpha-D-glucose phosphate-specific; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01132. | 0.900 |
| deoB | prs | SbBS512_E4930 | SbBS512_E1371 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.909 |
| deoB | rbsK | SbBS512_E4930 | SbBS512_E4167 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.900 |
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