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| | eutJ | Ethanolamine utilization protein EutJ; Identified by match to protein family HMM TIGR02529. (278 aa) |
| | ACD08982.1 | Putative IS1 encoded protein. (96 aa) |
| | hscA | Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU. (616 aa) |
| | srmB | ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. (444 aa) |
| | clpB | ATP-dependent chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (857 aa) |
| | ACD08253.1 | Putative IS1 encoded protein. (76 aa) |
| | ACD06849.1 | Putative IS1 encoded protein. (65 aa) |
| | aas | 2-acyl-glycerophospho-ethanolamine acyltransferase/acyl-acyl-carrier protein synthetase; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1. (719 aa) |
| | recC | Exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (1122 aa) |
| | recB | Exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (1180 aa) |
| | recD | Exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (608 aa) |
| | ACD08934.1 | Putative IS1 encoded protein. (81 aa) |
| | ACD09365.1 | Transposase. (74 aa) |
| | mutS | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (853 aa) |
| | recA | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (353 aa) |
| | ACD10080.1 | Putative IS1 encoded protein. (76 aa) |
| | ACD08242.1 | Transposase. (90 aa) |
| | ACD09034.1 | Putative IS1 encoded protein. (63 aa) |
| | ACD09358.1 | Transposase. (59 aa) |
| | copA | Copper-exporting ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. (834 aa) |
| | ACD08465.1 | Putative IS1 encoded protein. (66 aa) |
| | htpG | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. (624 aa) |
| | ACD07559.1 | Conserved hypothetical protein. (49 aa) |
| | mdlA | Multidrug resistance, ATP-binding protein mdlA; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (553 aa) |
| | lon | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. Endogenous substrates include the regulatory proteins RcsA and SulA, the transcriptional activator SoxS, and UmuD. Its overproduction spec [...] (784 aa) |
| | clpX | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (424 aa) |
| | clpP | ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (207 aa) |
| | ACD09875.1 | Conserved hypothetical protein. (93 aa) |
| | secF | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (323 aa) |
| | secD | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (615 aa) |
| | sbcC | Nuclease SbcCD, C subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SMC family. SbcC subfamily. (1047 aa) |
| | ACD08636.1 | Putative IS1 encoded protein. (80 aa) |
| | ACD09296.1 | Transposase. (62 aa) |
| | ACD06724.1 | Conserved hypothetical protein. (68 aa) |
| | ACD08006.1 | Conserved hypothetical protein. (246 aa) |
| | ACD08927.1 | Transposase. (64 aa) |
| | ACD09771.1 | Transposase. (71 aa) |
| | metN | D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (343 aa) |
| | hrpB | ATP-dependent helicase HrpB; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF08482; match to protein family HMM TIGR01970. (809 aa) |
| | secA | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (901 aa) |
| | thiQ | Thiamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. (232 aa) |
| | rapA | RNA polymerase associated protein RapA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. (968 aa) |
| | ACD09725.1 | Transposase. (62 aa) |
| | dnaK | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (638 aa) |
| | ACD10059.1 | Transposase. (62 aa) |
| | rho | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (419 aa) |
| | rhlB | ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily. (421 aa) |
| | rep | ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. (673 aa) |
| | ACD10382.1 | Hypothetical protein; Identified by glimmer; putative. (468 aa) |
| | atpA | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (513 aa) |
| | atpD | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (460 aa) |
| | pstB | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (257 aa) |
| | ACD09122.1 | ShiE. (63 aa) |
| | gyrB | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (804 aa) |
| | uvrD | DNA helicase II; Identified by match to protein family HMM PF00580; match to protein family HMM TIGR01075. (720 aa) |
| | recQ | ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389. (609 aa) |
| | ACD07033.1 | Putative IS1 encoded protein. (69 aa) |
| | ACD09904.1 | Transposase. (60 aa) |
| | hslU | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (443 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (732 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (471 aa) |
| | ACD07126.1 | Transposase. (67 aa) |
| | ACD07442.1 | Transposase. (61 aa) |
| | uvrA | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (940 aa) |
| | ACD10282.1 | Putative IS1 encoded protein. (62 aa) |
| | phnE | Phosphonate ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01097. (259 aa) |
| | ACD07940.1 | Putative IS1 encoded protein. (76 aa) |
| | groS | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. (97 aa) |
| | groL | Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (548 aa) |
| | ACD08211.1 | Transposase. (71 aa) |
| | mutL | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (615 aa) |
| | ACD06682.1 | Transposase. (65 aa) |
| | ACD06704.1 | Type III restriction enzyme, res subunit; Identified by match to protein family HMM PF00270; match to protein family HMM PF04313; match to protein family HMM PF04851. (1137 aa) |
| | ACD08430.1 | Transposase. (69 aa) |
| | ACD09160.1 | Transposase. (77 aa) |
| | mgtA | Magnesium-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524. (898 aa) |
| | ACD08204.1 | Putative IS1 encoded protein. (74 aa) |
| | radA | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (460 aa) |
| | ACD06493.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (555 aa) |
| | ACD07290.1 | Putative IS1 encoded protein. (102 aa) |
| | ACD08177.1 | Transposase. (82 aa) |
| | rbsA | D-ribose ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (187 aa) |
| | ACD09890.1 | Putative IS1 encoded protein. (61 aa) |
| | ACD07354.1 | Transposase. (63 aa) |
| | parC | DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (752 aa) |
| | parE | DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (630 aa) |
| | ACD10246.1 | Transposase. (62 aa) |
| | ACD10149.1 | Putative IS1 encoded protein. (78 aa) |
| | zapE | ATPase, AFG1 family; Reduces the stability of FtsZ polymers in the presence of ATP. (375 aa) |
| | hflB | ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (647 aa) |
| | secG | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (110 aa) |
| | deaD | Cold-shock DEAD box protein A; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. (651 aa) |
| | ACD06579.1 | Transposase. (59 aa) |
| | ACD07248.1 | Transposase. (59 aa) |
| | ACD10495.1 | Amino acid ABC transporter, ATP-binding protein; yhdZ; identified by match to protein family HMM PF00005. (252 aa) |
| | ACD10170.1 | Putative IS1 encoded protein. (75 aa) |
| | ACD06938.1 | Putative membrane protein. (574 aa) |
| | ACD08897.1 | Transposase. (74 aa) |
| | nikE | Nickel ABC transporter, ATP-binding protein NikE; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. (268 aa) |
| | nikD | Nickel ABC transporter, ATP-binding protein NikD; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. (254 aa) |
| | cadA | Cadmium-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525. (732 aa) |
| | ugpC | Sn-glycerol-3-phosphate transport ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (356 aa) |
| | ACD06828.1 | Putative IS1 encoded protein. (68 aa) |
| | ACD08455.1 | Transposase. (100 aa) |
| | ACD07288.1 | Putative IS1 encoded protein. (68 aa) |
| | ACD10359.1 | Transposase. (71 aa) |
| | ACD06955.1 | Conserved hypothetical protein. (62 aa) |
| | xylG | D-xylose ABC transporter, ATP-binding protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (513 aa) |
| | ACD08267.1 | Transposase. (70 aa) |
| | ACD08067.1 | Putative IS1 encoded protein. (74 aa) |
| | ACD10048.1 | Putative IS1 encoded protein. (85 aa) |
| | ACD09681.1 | Transposase. (63 aa) |
| | ACD06421.1 | Putative IS1 encoded protein. (73 aa) |
| | ACD09359.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF07929. (180 aa) |
| | recG | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (693 aa) |
| | ACD07443.1 | Putative IS1 encoded protein. (75 aa) |
| | ACD07814.1 | Transposase. (68 aa) |
| | hrpA | ATP-dependent helicase HrpA; Identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967. (1300 aa) |
| | ACD07789.1 | Transposase. (59 aa) |
| | ACD06634.1 | Putative IS1 encoded protein. (62 aa) |
| | ACD08421.1 | Putative IS1 encoded protein. (60 aa) |
| | dbpA | ATP-independent RNA helicase DbpA; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. (457 aa) |
| | ACD09723.1 | Transposase. (70 aa) |
| | ompG | Monomeric porin OmpG; Identified by match to protein family HMM PF09381. (301 aa) |
| | ACD06294.1 | Transposase. (60 aa) |
| | ACD06524.1 | Transposase. (59 aa) |
| | ACD09848.1 | Putative IS1 encoded protein. (97 aa) |
| | ACD06399.1 | Putative IS1 encoded protein. (77 aa) |
| | ACD10490.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF02413. (89 aa) |
| | ACD06489.1 | Tail fiber assembly protein; Identified by match to protein family HMM PF02413. (194 aa) |
| | ACD06619.1 | Phage terminase large subunit (GpA); Identified by match to protein family HMM PF05876. (642 aa) |
| | ACD07465.1 | Transposase. (79 aa) |
| | engD | GTP-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (363 aa) |
| | ACD09995.1 | Putative IS1 encoded protein. (90 aa) |
| | ACD09901.1 | Putative IS1 encoded protein. (74 aa) |
| | minD | Septum site-determining protein MinD; Identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968. (270 aa) |
| | ACD07610.1 | Putative IS1 encoded protein. (84 aa) |
| | potA | Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (378 aa) |
| | potB | Spermidine/putrescine ABC transporter, permease protein PotB; Identified by match to protein family HMM PF00528. (287 aa) |
| | ACD08087.1 | Phage terminase large subunit (GpA); Identified by match to protein family HMM PF05876. (642 aa) |
| | ACD07775.1 | Conserved hypothetical protein. (450 aa) |
| | ACD09073.1 | Transposase. (81 aa) |
| | yecC | Amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (250 aa) |
| | araF | L-arabinose ABC transporter, periplasmic L-arabinose-binding protein; Identified by match to protein family HMM PF00532. (329 aa) |
| | araG | L-arabinose ABC transporter, ATP-binding protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. (504 aa) |
| | ACD07325.1 | Domain of unknown function superfamily; Identified by match to protein family HMM PF02413. (89 aa) |
| | ACD09968.1 | Putative tail component of prophage. (205 aa) |
| | ACD06370.1 | Tail fiber assembly protein; Identified by match to protein family HMM PF02413. (181 aa) |
| | ACD09132.1 | Conserved hypothetical protein. (64 aa) |
| | ACD10139.1 | Putative IS1 encoded protein. (64 aa) |
| | ruvA | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (203 aa) |
| | ruvB | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (336 aa) |
| | znuC | High-affinity zinc uptake ABC transporter, ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (251 aa) |
| | ACD07464.1 | Transposase. (62 aa) |
| | ACD09703.1 | ShiE. (61 aa) |
| | ACD09370.1 | Putative Tail fiber assembly protein homolog; Identified by match to protein family HMM PF02413. (190 aa) |
| | ACD08323.1 | Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (369 aa) |
| | ACD08814.1 | Galactose/methyl galactoside import ATP-binding protein MglA. (92 aa) |
| | ACD09565.1 | Galactose binding protein. (137 aa) |
| | mglA | Galactoside ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (334 aa) |
| | ACD09372.1 | Putative IS1 encoded protein. (62 aa) |
| | ACD06460.1 | Putative helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. (586 aa) |
| | ACD07557.1 | Conserved hypothetical protein. (711 aa) |
| | ACD07449.1 | Transposase. (68 aa) |
| | ccmA | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (205 aa) |
| | ACD10211.1 | ABC transporter ATP-binding protein; Identified by similarity to SP:P33941; match to protein family HMM PF00005; match to protein family HMM TIGR01194. (547 aa) |
| | modC | Molybdate ABC transporter, ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (352 aa) |
| | ACD06476.1 | Transposase. (60 aa) |
| | hscC | Identified by match to protein family HMM PF00012; Belongs to the heat shock protein 70 family. (556 aa) |
| | gltL | Glutamate/aspartate ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (241 aa) |
| | ACD07495.1 | Putative IS1 encoded protein. (74 aa) |
| | ACD07652.1 | Transposase. (62 aa) |
| | kdpB | K+-transporting ATPase, B subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily. (682 aa) |
| | kdpA | K+-transporting ATPase, A subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. (557 aa) |
| | kdpF | K+-transporting ATPase, F subunit; Identified by match to protein family HMM TIGR02115. (67 aa) |
| | ACD09401.1 | Putative IS1 encoded protein. (92 aa) |
| | ACD10150.1 | Transposase. (71 aa) |
| | ACD06475.1 | Putative IS1 encoded protein. (65 aa) |
| | ACD10372.1 | Inner membrane ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF05992; match to protein family HMM PF06472. (561 aa) |
| | ACD08773.1 | Conserved hypothetical protein. (82 aa) |
| | btuD | Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. (249 aa) |
| | ACD09204.1 | Plasmid segregation protein ParM; Identified by match to protein family HMM PF06406. (205 aa) |
| | ACD09435.1 | Transposase. (59 aa) |
| | ACD07161.1 | Transposase. (63 aa) |
| | ACD06700.1 | Putative IS1 encoded protein. (82 aa) |
| | ACD06843.1 | Transposase. (78 aa) |
| | ACD09556.1 | Putative IS1 encoded protein. (79 aa) |
| | ACD08912.1 | Conserved hypothetical protein. (636 aa) |
| | ACD10237.1 | ShiE. (82 aa) |
| | ACD07570.1 | Putative IS1 encoded protein. (68 aa) |
| | malF | Maltose/maltodextrin ABC transporter, permease protein MalF; Identified by match to protein family HMM PF00528. (429 aa) |
| | ACD09634.1 | ABC ATPase. (91 aa) |
| | potC | Spermidine/putrescine ABC transporter, permease protein PotC; Identified by match to protein family HMM PF00528. (264 aa) |
| | mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1148 aa) |
| | ACD07918.1 | ShiE. (61 aa) |
| | helD | Helicase IV; Identified by match to protein family HMM PF00580. (684 aa) |
| | ACD08396.1 | Peptidase, S16 (lon protease) family; Identified by match to protein family HMM PF05362. (586 aa) |
| | ACD09032.1 | ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR01728. (333 aa) |
| | msbA | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (582 aa) |
| | ACD10168.1 | Putative DNA recombination-associated ATPase RarA; Identified by match to protein family HMM PF00004. (447 aa) |
| | cydD | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857. (588 aa) |
| | cudC | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR02868. (573 aa) |
| | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA; Identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; Belongs to the ClpA/ClpB family. (758 aa) |
| | artP | Arginine ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (242 aa) |
| | potI | Putrescine ABC transporter, permease protein PotI; Identified by match to protein family HMM PF00528. (281 aa) |
| | potH | Putrescine ABC transporter, permease protein PotH; Identified by match to protein family HMM PF00528. (317 aa) |
| | potG | Putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (377 aa) |
| | glnQ | Glutamine ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (240 aa) |
| | dinG | Putative ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. (716 aa) |
| | rhlE | Putative ATP-dependent RNA helicase RhlE; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. (454 aa) |
| | uvrB | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (673 aa) |
| | ACD07963.1 | Tail fiber assembly protein; Identified by match to protein family HMM PF02413. (180 aa) |
| | gyrA | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (875 aa) |
| | ACD08696.1 | Conserved hypothetical protein. (63 aa) |
| | ACD06445.1 | Conserved hypothetical protein; Identified by match to protein family HMM PF08974. (167 aa) |
| | ACD07953.1 | Transposase. (62 aa) |
| | hisP | Histidine ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (257 aa) |
| | cysA | Sulfate/thiosulfate ABC transporter, ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (365 aa) |
| | cysW | Sulfate ABC transporter, permease protein CysW; Identified by similarity to SP:P0AEB0; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140. (291 aa) |
| | cysT | Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (277 aa) |
| | ACD08494.1 | Putative IS1 encoded protein. (78 aa) |
