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| | mdlA | Multidrug resistance, ATP-binding protein mdlA; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (553 aa) |
| | thiQ | Thiamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family. (232 aa) |
| | ACD06361.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (308 aa) |
| | fhuC | Ferrichrome transport ATP-binding protein FhuC; Identified by match to protein family HMM PF00005. (265 aa) |
| | metN | D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (343 aa) |
| | tauB | Taurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. (255 aa) |
| | lon | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. Endogenous substrates include the regulatory proteins RcsA and SulA, the transcriptional activator SoxS, and UmuD. Its overproduction spec [...] (784 aa) |
| | dnaX | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (643 aa) |
| | ACD06765.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (225 aa) |
| | ACD09260.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (228 aa) |
| | fepC | Ferric enterobactin ABC transporter, ATP-binding protein FepC; Identified by match to protein family HMM PF00005. (271 aa) |
| | gltL | Glutamate/aspartate ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (241 aa) |
| | modF | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (490 aa) |
| | modC | Molybdate ABC transporter, ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (352 aa) |
| | ACD10211.1 | ABC transporter ATP-binding protein; Identified by similarity to SP:P33941; match to protein family HMM PF00005; match to protein family HMM TIGR01194. (547 aa) |
| | ccmA | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (205 aa) |
| | ACD07448.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (529 aa) |
| | mglA | Galactoside ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (334 aa) |
| | ACD08623.1 | ABC transporter, quaternary amine uptake (QAT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. (308 aa) |
| | znuC | High-affinity zinc uptake ABC transporter, ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (251 aa) |
| | ruvB | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (336 aa) |
| | araG | L-arabinose ABC transporter, ATP-binding protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. (504 aa) |
| | yecC | Amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (250 aa) |
| | potA | Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (378 aa) |
| | dhaR | PTS-dependent dihydroxyacetone kinase operon regulatory protein, DhaR; Identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02954. (639 aa) |
| | oppD | Oligopeptide ABC transporter, ATP-binding protein OppD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (337 aa) |
| | oppF | Oligopeptide ABC transporter, ATP-binding protein OppF; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (334 aa) |
| | sapF | Peptide ABC transporter, ATP-binding protein SapF; Identified by match to protein family HMM PF00005. (268 aa) |
| | sapD | Peptide ABC transporter, ATP-binding protein SapD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (330 aa) |
| | pspF | Sigma-54 dependent transcriptional regulator PspF; Identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; match to protein family HMM TIGR02974. (325 aa) |
| | tyrR | Transcriptional regulatory protein TyrR; Identified by match to protein family HMM PF00158; match to protein family HMM PF01842. (513 aa) |
| | sitB_2 | Iron/manganese transport system inner membrane protein SitB; Identified by match to protein family HMM PF00005. (275 aa) |
| | hrpA | ATP-dependent helicase HrpA; Identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967. (1300 aa) |
| | ACD08966.1 | Putative ABC transport system ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (308 aa) |
| | ACD08157.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (328 aa) |
| | ACD10372.1 | Inner membrane ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF05992; match to protein family HMM PF06472. (561 aa) |
| | sufC | FeS assembly ATPase SufC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978. (248 aa) |
| | btuD | Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. (249 aa) |
| | ACD08138.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (217 aa) |
| | lolD | Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (233 aa) |
| | uup | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02463. (635 aa) |
| | msbA | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (582 aa) |
| | ACD10168.1 | Putative DNA recombination-associated ATPase RarA; Identified by match to protein family HMM PF00004. (447 aa) |
| | cydD | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857. (588 aa) |
| | cudC | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR02868. (573 aa) |
| | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA; Identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; Belongs to the ClpA/ClpB family. (758 aa) |
| | macB | Macrolide-specific ABC-type efflux carrier protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (648 aa) |
| | artP | Arginine ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (242 aa) |
| | potG | Putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (377 aa) |
| | gsiA | Glutathione ABC transporter, ATP-binding protein GsiA; Identified by similarity to SP:P75796; match to protein family HMM PF00005; match to protein family HMM PF08352; Belongs to the ABC transporter superfamily. (623 aa) |
| | ACD07573.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (530 aa) |
| | glnQ | Glutamine ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (240 aa) |
| | ACD06569.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (578 aa) |
| | hisP | Histidine ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (257 aa) |
| | cysA | Sulfate/thiosulfate ABC transporter, ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (365 aa) |
| | ACD09202.1 | Sigma-54 dependent response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728. (444 aa) |
| | clpB | ATP-dependent chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (857 aa) |
| | recD | Exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (608 aa) |
| | norR | Anaerobic nitric oxide reductase transcription regulator NorR; Identified by match to protein family HMM PF00158; match to protein family HMM PF01590. (504 aa) |
| | recA | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (353 aa) |
| | proV | Glycine betaine/L-proline ABC transporter, ATP binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. (400 aa) |
| | ACD06319.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (225 aa) |
| | ACD07459.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (236 aa) |
| | ACD07543.1 | Identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420. (326 aa) |
| | lptB | Lipopolysaccharide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (241 aa) |
| | ACD06852.1 | Toluene ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (269 aa) |
| | hflB | ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (647 aa) |
| | ACD10495.1 | Amino acid ABC transporter, ATP-binding protein; yhdZ; identified by match to protein family HMM PF00005. (252 aa) |
| | ACD08303.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (637 aa) |
| | rtcR | Sigma-54 dependent transcriptional regulator RtcR; Identified by match to protein family HMM PF00158; match to protein family HMM PF06956; match to protein family HMM PF07728. (532 aa) |
| | ACD06351.1 | ABC transporter, ATP binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF01061. (911 aa) |
| | nikE | Nickel ABC transporter, ATP-binding protein NikE; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. (268 aa) |
| | nikD | Nickel ABC transporter, ATP-binding protein NikD; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. (254 aa) |
| | ftsE | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (222 aa) |
| | livG | High-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivG; Identified by match to protein family HMM PF00005. (255 aa) |
| | livF | High-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (241 aa) |
| | ugpC | Sn-glycerol-3-phosphate transport ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (356 aa) |
| | xylG | D-xylose ABC transporter, ATP-binding protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (513 aa) |
| | dppD | Dipeptide ABC transporter, ATP-binding protein DppD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (327 aa) |
| | dppF | Dipeptide ABC transporter, ATP-binding protein DppF; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (334 aa) |
| | rho | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (419 aa) |
| | ACD08392.1 | ATPase, AAA family; Identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368. (506 aa) |
| | ACD10382.1 | Hypothetical protein; Identified by glimmer; putative. (468 aa) |
| | atpD | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (460 aa) |
| | pstB | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (257 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (467 aa) |
| | ntrC | Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (469 aa) |
| | hslU | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (443 aa) |
| | zraR | Response regulator ZraR; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728. (441 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (471 aa) |
| | dnaC | DNA replication protein DnaC. (245 aa) |
| | radA | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (460 aa) |
| | ACD06493.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (555 aa) |
