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ilvH ilvH sdhC sdhC sdhD sdhD sdhA sdhA sdhB sdhB adhE adhE gabT1 gabT1 ydbK ydbK ACD07245.1 ACD07245.1 gadB gadB pct pct ttuC ttuC pflB2 pflB2 ACD09880.1 ACD09880.1 fadJ fadJ ACD08517.1 ACD08517.1 pflB1 pflB1 ilvM ilvM ilvG ilvG ilvB ilvB ilvN ilvN fadB fadB ACD09069.1 ACD09069.1 frdD frdD frdC frdC frdB frdB frdA frdA ACD08669.1 ACD08669.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ilvHAcetolactate synthase, small subunit, isozyme III; Identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119. (163 aa)
sdhCSuccinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970. (134 aa)
sdhDSuccinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (115 aa)
sdhASuccinate dehydrogenase, flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (588 aa)
sdhBSuccinate dehydrogenase, iron-sulfur subunit; Identified by match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (238 aa)
adhEAldehyde-alcohol dehydrogenase; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (891 aa)
gabT14-aminobutyrate transaminase; Identified by match to protein family HMM PF00202; match to protein family HMM TIGR00700; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (421 aa)
ydbKPyruvate-flavodoxin oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. (1174 aa)
ACD07245.1Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171. (462 aa)
gadBGlutamate decarboxylase GadB; Identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; Belongs to the group II decarboxylase family. (466 aa)
pctPropionate CoA-transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. (531 aa)
ttuCTartrate dehydrogenase/decarboxylase; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR02089. (361 aa)
pflB2Formate acetyltransferase; Identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255. (760 aa)
ACD09880.1Formate C-acetyltransferase 3; Identified by similarity to SP:P75793; match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01774. (810 aa)
fadJFatty oxidation complex, alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (714 aa)
ACD08517.1acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
pflB1Formate acetyltransferase; Identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255. (764 aa)
ilvMAcetolactate synthase, isozyme II, small subunit. (87 aa)
ilvGAcetolactate synthase, large subunit, isozyme II; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118. (548 aa)
ilvBAcetolactate synthase, large subunit, isozyme I; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118. (562 aa)
ilvNAcetolactate synthase, isozyme I, small subunit; Identified by match to protein family HMM PF01842. (96 aa)
fadBFatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (729 aa)
ACD09069.1Formate C-acetyltransferase 2; Identified by similarity to SP:P32674; match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01774. (765 aa)
frdDFumarate reductase, D subunit; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (119 aa)
frdCFumarate reductase, cytochrome b subunit; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (131 aa)
frdBFumarate reductase, iron-sulfur protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (244 aa)
frdAFumarate reductase, flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM PF07992; match to protein family HMM TIGR01176; match to protein family HMM TIGR01812. (602 aa)
ACD08669.1Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
Your Current Organism:
Shigella boydii
NCBI taxonomy Id: 344609
Other names: S. boydii CDC 3083-94, Shigella boydii BS512, Shigella boydii CDC 3083-94, Shigella boydii str. CDC 3083-94, Shigella boydii strain CDC 3083-94
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