(15 nodes) Preribosome, large subunit precursor, and rRNA (cytosine) methyltransferase activity network (Aspergillus clavatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	ACLA_003560	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (755 aa)
	ACLA_076020	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (692 aa)
	ACLA_076030	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (207 aa)
	ACLA_009190	RNA processing factor 1. (436 aa)
	ACLA_015290	rRNA processing protein (Ebp2), putative. (371 aa)
	ACLA_007150	Uncharacterized protein. (404 aa)
	ACLA_045660	Ribosomal biogenesis protein Gar2. (489 aa)
	ytm1	Ribosome biogenesis protein ytm1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (488 aa)
	nop7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (680 aa)
	has1	ATP-dependent RNA helicase has1; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA. (625 aa)
	ACLA_096580	Protein MAK16; Belongs to the MAK16 family. (323 aa)
	ACLA_019230	Ribosome assembly protein Noc2, putative. (785 aa)
	ACLA_024520	Ribosomal RNA processing protein, putative. (332 aa)
	ACLA_024970	GTP-binding protein. (549 aa)
	erb1	Ribosome biogenesis protein erb1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (788 aa)

Your Current Organism:

Aspergillus clavatus

NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACLA_003560	ACLA_007150	A1C5H5	A1CDM9	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Uncharacterized protein.	0.993
ACLA_003560	ACLA_009190	A1C5H5	A1C9T1	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	RNA processing factor 1.	0.976
ACLA_003560	ACLA_015290	A1C5H5	A1CBH3	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	rRNA processing protein (Ebp2), putative.	0.994
ACLA_003560	ACLA_019230	A1C5H5	A1CNJ7	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Ribosome assembly protein Noc2, putative.	0.997
ACLA_003560	ACLA_024520	A1C5H5	A1CQ15	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Ribosomal RNA processing protein, putative.	0.982
ACLA_003560	ACLA_024970	A1C5H5	A1CQ60	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	GTP-binding protein.	0.997
ACLA_003560	ACLA_045660	A1C5H5	A1CGU6	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Ribosomal biogenesis protein Gar2.	0.995
ACLA_003560	ACLA_076020	A1C5H5	A1C841	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.990
ACLA_003560	ACLA_076030	A1C5H5	A1C842	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.998
ACLA_003560	ACLA_096580	A1C5H5	A1CMD8	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Protein MAK16; Belongs to the MAK16 family.	0.965
ACLA_003560	erb1	A1C5H5	A1CQI9	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Ribosome biogenesis protein erb1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.997
ACLA_003560	has1	A1C5H5	A1CIQ5	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	ATP-dependent RNA helicase has1; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA.	0.994
ACLA_003560	nop7	A1C5H5	A1CHD1	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.991
ACLA_003560	ytm1	A1C5H5	A1CH75	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Ribosome biogenesis protein ytm1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.990
ACLA_007150	ACLA_003560	A1CDM9	A1C5H5	Uncharacterized protein.	Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.993
ACLA_007150	ACLA_009190	A1CDM9	A1C9T1	Uncharacterized protein.	RNA processing factor 1.	0.986
ACLA_007150	ACLA_015290	A1CDM9	A1CBH3	Uncharacterized protein.	rRNA processing protein (Ebp2), putative.	0.993
ACLA_007150	ACLA_019230	A1CDM9	A1CNJ7	Uncharacterized protein.	Ribosome assembly protein Noc2, putative.	0.992
ACLA_007150	ACLA_024520	A1CDM9	A1CQ15	Uncharacterized protein.	Ribosomal RNA processing protein, putative.	0.992
ACLA_007150	ACLA_024970	A1CDM9	A1CQ60	Uncharacterized protein.	GTP-binding protein.	0.992