(10 nodes) Mixed, incl. RNA helicase, DEAD-box type, Q motif, and CBF/Mak21 family network (Aspergillus clavatus)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	ACLA_057760	RNA binding protein, putative. (536 aa)
	dbp9	ATP-dependent RNA helicase dbp9; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX56/DBP9 subfamily. (621 aa)
	dbp7	ATP-dependent RNA helicase dbp7; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs. (755 aa)
	ACLA_045570	Ribosome biogenesis (Nop4), putative. (735 aa)
	nop9	Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. (692 aa)
	drs1	ATP-dependent RNA helicase drs1; ATP-binding RNA helicase involved in ribosome assembly. (826 aa)
	ACLA_024760	CCAAT-box-binding transcription factor. (1104 aa)
	ACLA_029830	Pre-rRNA processing protein Mrd1, putative. (822 aa)
	mak5	ATP-dependent RNA helicase mak5; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX24/MAK5 subfamily. (774 aa)
	dbp10	ATP-dependent RNA helicase dbp10; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (935 aa)

Your Current Organism:

Aspergillus clavatus

NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACLA_024760	ACLA_029830	A1CQ39	A1CRH9	CCAAT-box-binding transcription factor.	Pre-rRNA processing protein Mrd1, putative.	0.841
ACLA_024760	ACLA_045570	A1CQ39	A1CGT7	CCAAT-box-binding transcription factor.	Ribosome biogenesis (Nop4), putative.	0.966
ACLA_024760	ACLA_057760	A1CQ39	A1C3Y0	CCAAT-box-binding transcription factor.	RNA binding protein, putative.	0.944
ACLA_024760	dbp10	A1CQ39	A1CTZ6	CCAAT-box-binding transcription factor.	ATP-dependent RNA helicase dbp10; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.	0.715
ACLA_024760	dbp7	A1CQ39	A1CB55	CCAAT-box-binding transcription factor.	ATP-dependent RNA helicase dbp7; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs.	0.719
ACLA_024760	dbp9	A1CQ39	A1C7F7	CCAAT-box-binding transcription factor.	ATP-dependent RNA helicase dbp9; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX56/DBP9 subfamily.	0.965
ACLA_024760	drs1	A1CQ39	A1CNV8	CCAAT-box-binding transcription factor.	ATP-dependent RNA helicase drs1; ATP-binding RNA helicase involved in ribosome assembly.	0.859
ACLA_024760	mak5	A1CQ39	A1CTL8	CCAAT-box-binding transcription factor.	ATP-dependent RNA helicase mak5; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX24/MAK5 subfamily.	0.894
ACLA_024760	nop9	A1CQ39	A1CKL4	CCAAT-box-binding transcription factor.	Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family.	0.840
ACLA_029830	ACLA_024760	A1CRH9	A1CQ39	Pre-rRNA processing protein Mrd1, putative.	CCAAT-box-binding transcription factor.	0.841
ACLA_029830	ACLA_045570	A1CRH9	A1CGT7	Pre-rRNA processing protein Mrd1, putative.	Ribosome biogenesis (Nop4), putative.	0.780
ACLA_029830	ACLA_057760	A1CRH9	A1C3Y0	Pre-rRNA processing protein Mrd1, putative.	RNA binding protein, putative.	0.798
ACLA_029830	dbp10	A1CRH9	A1CTZ6	Pre-rRNA processing protein Mrd1, putative.	ATP-dependent RNA helicase dbp10; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.	0.852
ACLA_029830	dbp7	A1CRH9	A1CB55	Pre-rRNA processing protein Mrd1, putative.	ATP-dependent RNA helicase dbp7; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs.	0.848
ACLA_029830	dbp9	A1CRH9	A1C7F7	Pre-rRNA processing protein Mrd1, putative.	ATP-dependent RNA helicase dbp9; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX56/DBP9 subfamily.	0.870
ACLA_029830	drs1	A1CRH9	A1CNV8	Pre-rRNA processing protein Mrd1, putative.	ATP-dependent RNA helicase drs1; ATP-binding RNA helicase involved in ribosome assembly.	0.802
ACLA_029830	mak5	A1CRH9	A1CTL8	Pre-rRNA processing protein Mrd1, putative.	ATP-dependent RNA helicase mak5; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX24/MAK5 subfamily.	0.827
ACLA_029830	nop9	A1CRH9	A1CKL4	Pre-rRNA processing protein Mrd1, putative.	Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family.	0.860
ACLA_045570	ACLA_024760	A1CGT7	A1CQ39	Ribosome biogenesis (Nop4), putative.	CCAAT-box-binding transcription factor.	0.966
ACLA_045570	ACLA_029830	A1CGT7	A1CRH9	Ribosome biogenesis (Nop4), putative.	Pre-rRNA processing protein Mrd1, putative.	0.780