STRINGSTRING
ACLA_003480 ACLA_003480 ACLA_073430 ACLA_073430 ACLA_010920 ACLA_010920 ACLA_014620 ACLA_014620 ACLA_060600 ACLA_060600 ACLA_051140 ACLA_051140 trm8 trm8 ACLA_051720 ACLA_051720 dus3 dus3 trm82 trm82 ACLA_080300 ACLA_080300 ACLA_081660 ACLA_081660 ACLA_083490 ACLA_083490
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACLA_003480Eukaryotic translation initiation factor 3, gamma subunit, putative. (577 aa)
ACLA_073430HEAT repeat protein. (1642 aa)
ACLA_010920tRNA methyltransferase subunit GCD14, putative. (505 aa)
ACLA_014620tRNA(M5U54)methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (579 aa)
ACLA_060600N2,N2-dimethylguanosine tRNA methyltransferase, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (1045 aa)
ACLA_051140RNA methylase family protein. (480 aa)
trm8tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (339 aa)
ACLA_051720tRNA (Adenine-N(1)-)-methyltransferase. (443 aa)
dus3tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs (By similarity). (728 aa)
trm82tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit trm82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (495 aa)
ACLA_080300tRNA pseudouridine synthase, putative. (568 aa)
ACLA_081660WD repeat protein. (1163 aa)
ACLA_083490Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (428 aa)
Your Current Organism:
Aspergillus clavatus
NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1
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