(8 nodes) Mixed, incl. Regulation of mRNA splicing, via spliceosome, and U1 snRNP binding network (Aspergillus clavatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACLA_066440	Cysteine-rich secreted protein. (476 aa)
	ACLA_035490	Rna-binding protein. (726 aa)
	ACLA_036590	Altered inheritance of mitochondria protein 24, mitochondrial. (336 aa)
	ACLA_038420	Serine/threonine protein kinase (Prp4), putative. (800 aa)
	ACLA_097830	Uncharacterized protein. (291 aa)
	ACLA_019550	RNA splicing factor (Pad-1), putative. (566 aa)
	ACLA_023690	Uncharacterized protein. (237 aa)
	ACLA_085840	Uncharacterized protein. (299 aa)

Your Current Organism:

Aspergillus clavatus

NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACLA_019550	ACLA_023690	A1CNM9	A1CPT4	RNA splicing factor (Pad-1), putative.	Uncharacterized protein.	0.583
ACLA_019550	ACLA_035490	A1CNM9	A1CJM2	RNA splicing factor (Pad-1), putative.	Rna-binding protein.	0.749
ACLA_019550	ACLA_036590	A1CNM9	A1CJY1	RNA splicing factor (Pad-1), putative.	Altered inheritance of mitochondria protein 24, mitochondrial.	0.466
ACLA_019550	ACLA_038420	A1CNM9	A1CKF7	RNA splicing factor (Pad-1), putative.	Serine/threonine protein kinase (Prp4), putative.	0.709
ACLA_019550	ACLA_066440	A1CNM9	A1CGC8	RNA splicing factor (Pad-1), putative.	Cysteine-rich secreted protein.	0.865
ACLA_019550	ACLA_085840	A1CNM9	A1CUA0	RNA splicing factor (Pad-1), putative.	Uncharacterized protein.	0.497
ACLA_023690	ACLA_019550	A1CPT4	A1CNM9	Uncharacterized protein.	RNA splicing factor (Pad-1), putative.	0.583
ACLA_023690	ACLA_036590	A1CPT4	A1CJY1	Uncharacterized protein.	Altered inheritance of mitochondria protein 24, mitochondrial.	0.567
ACLA_023690	ACLA_038420	A1CPT4	A1CKF7	Uncharacterized protein.	Serine/threonine protein kinase (Prp4), putative.	0.569
ACLA_023690	ACLA_085840	A1CPT4	A1CUA0	Uncharacterized protein.	Uncharacterized protein.	0.569
ACLA_035490	ACLA_019550	A1CJM2	A1CNM9	Rna-binding protein.	RNA splicing factor (Pad-1), putative.	0.749
ACLA_035490	ACLA_038420	A1CJM2	A1CKF7	Rna-binding protein.	Serine/threonine protein kinase (Prp4), putative.	0.668
ACLA_036590	ACLA_019550	A1CJY1	A1CNM9	Altered inheritance of mitochondria protein 24, mitochondrial.	RNA splicing factor (Pad-1), putative.	0.466
ACLA_036590	ACLA_023690	A1CJY1	A1CPT4	Altered inheritance of mitochondria protein 24, mitochondrial.	Uncharacterized protein.	0.567
ACLA_036590	ACLA_038420	A1CJY1	A1CKF7	Altered inheritance of mitochondria protein 24, mitochondrial.	Serine/threonine protein kinase (Prp4), putative.	0.590
ACLA_036590	ACLA_085840	A1CJY1	A1CUA0	Altered inheritance of mitochondria protein 24, mitochondrial.	Uncharacterized protein.	0.590
ACLA_036590	ACLA_097830	A1CJY1	A1CMQ5	Altered inheritance of mitochondria protein 24, mitochondrial.	Uncharacterized protein.	0.846
ACLA_038420	ACLA_019550	A1CKF7	A1CNM9	Serine/threonine protein kinase (Prp4), putative.	RNA splicing factor (Pad-1), putative.	0.709
ACLA_038420	ACLA_023690	A1CKF7	A1CPT4	Serine/threonine protein kinase (Prp4), putative.	Uncharacterized protein.	0.569
ACLA_038420	ACLA_035490	A1CKF7	A1CJM2	Serine/threonine protein kinase (Prp4), putative.	Rna-binding protein.	0.668