STRINGSTRING
sip5 sip5 ACLA_075610 ACLA_075610 ACLA_015650 ACLA_015650 ACLA_088330 ACLA_088330 ACLA_090610 ACLA_090610 ACLA_051090 ACLA_051090 ACLA_098050 ACLA_098050 ACLA_087320 ACLA_087320
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sip5Protein sip5; May negatively regulate the snf1 kinase; Belongs to the SIP5 family. (815 aa)
ACLA_075610DNA repair protein (RadR), putative. (416 aa)
ACLA_015650DNA excision repair protein (Rad5), putative. (1252 aa)
ACLA_088330SNF2 family helicase/ATPase, putative. (1473 aa)
ACLA_090610ATP-depentend DNA helicase, putative. (1000 aa)
ACLA_051090Ubiquitin-conjugating enzyme. (142 aa)
ACLA_098050Ubiquitin conjugating enzyme (UbcM), putative; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)
ACLA_087320Ubiquitin conjugating enzyme (UbcB), putative; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
Your Current Organism:
Aspergillus clavatus
NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1
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