(17 nodes) Retrograde transport at the Trans-Golgi-Network network (Aspergillus clavatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACLA_001590	COG2 domain-containing protein. (301 aa)
	ACLA_002250	SNARE domain protein. (247 aa)
	ACLA_002260	Uncharacterized protein. (375 aa)
	ACLA_002650	GARP complex component (Vps54), putative. (1095 aa)
	ACLA_068440	Cog4 domain-containing protein. (828 aa)
	ACLA_071230	Intracellular protein transport protein (Sat1), putative. (590 aa)
	ACLA_074510	Rab6. (229 aa)
	ACLA_049260	SNARE complex subunit (Tlg2), putative; Belongs to the syntaxin family. (385 aa)
	ACLA_049880	Vesicle transport v-snare protein, putative. (196 aa)
	ACLA_036800	Uncharacterized protein. (295 aa)
	ACLA_037900	Uncharacterized protein. (488 aa)
	ACLA_039010	Golgi complex component Cog3, putative. (784 aa)
	ACLA_096400	Uncharacterized protein. (782 aa)
	ACLA_025680	DUF1339 domain protein. (1068 aa)
	ACLA_029560	GARP complex subunit Vps53, putative. (856 aa)
	ACLA_030550	Vps52 / Sac2 family protein. (679 aa)
	cog6	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events (By similarity); Belongs to the COG6 family. (755 aa)

Your Current Organism:

Aspergillus clavatus

NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACLA_001590	ACLA_002250	A1C4Y0	A1C546	COG2 domain-containing protein.	SNARE domain protein.	0.595
ACLA_001590	ACLA_002260	A1C4Y0	A1C547	COG2 domain-containing protein.	Uncharacterized protein.	0.595
ACLA_001590	ACLA_002650	A1C4Y0	A1C586	COG2 domain-containing protein.	GARP complex component (Vps54), putative.	0.845
ACLA_001590	ACLA_025680	A1C4Y0	A1CQD0	COG2 domain-containing protein.	DUF1339 domain protein.	0.694
ACLA_001590	ACLA_029560	A1C4Y0	A1CRF5	COG2 domain-containing protein.	GARP complex subunit Vps53, putative.	0.847
ACLA_001590	ACLA_030550	A1C4Y0	A1CRQ1	COG2 domain-containing protein.	Vps52 / Sac2 family protein.	0.823
ACLA_001590	ACLA_036800	A1C4Y0	A1CK01	COG2 domain-containing protein.	Uncharacterized protein.	0.825
ACLA_001590	ACLA_037900	A1C4Y0	A1CKA6	COG2 domain-containing protein.	Uncharacterized protein.	0.992
ACLA_001590	ACLA_039010	A1C4Y0	A1CKL2	COG2 domain-containing protein.	Golgi complex component Cog3, putative.	0.997
ACLA_001590	ACLA_049260	A1C4Y0	A1CHU9	COG2 domain-containing protein.	SNARE complex subunit (Tlg2), putative; Belongs to the syntaxin family.	0.874
ACLA_001590	ACLA_049880	A1C4Y0	A1CI11	COG2 domain-containing protein.	Vesicle transport v-snare protein, putative.	0.904
ACLA_001590	ACLA_068440	A1C4Y0	A1C5Z6	COG2 domain-containing protein.	Cog4 domain-containing protein.	0.997
ACLA_001590	ACLA_074510	A1C4Y0	A1C7P3	COG2 domain-containing protein.	Rab6.	0.765
ACLA_001590	ACLA_096400	A1C4Y0	A1CMC0	COG2 domain-containing protein.	Uncharacterized protein.	0.997
ACLA_001590	cog6	A1C4Y0	A1CU89	COG2 domain-containing protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events (By similarity); Belongs to the COG6 family.	0.997
ACLA_002250	ACLA_001590	A1C546	A1C4Y0	SNARE domain protein.	COG2 domain-containing protein.	0.595
ACLA_002250	ACLA_002650	A1C546	A1C586	SNARE domain protein.	GARP complex component (Vps54), putative.	0.764
ACLA_002250	ACLA_025680	A1C546	A1CQD0	SNARE domain protein.	DUF1339 domain protein.	0.582
ACLA_002250	ACLA_029560	A1C546	A1CRF5	SNARE domain protein.	GARP complex subunit Vps53, putative.	0.770
ACLA_002250	ACLA_030550	A1C546	A1CRQ1	SNARE domain protein.	Vps52 / Sac2 family protein.	0.645