STRINGSTRING
ACLA_057570 ACLA_057570 ACLA_057760 ACLA_057760 ACLA_058040 ACLA_058040 ACLA_058190 ACLA_058190 ACLA_058850 ACLA_058850 ACLA_001170 ACLA_001170 ACLA_001180 ACLA_001180 ACLA_001250 ACLA_001250 ACLA_002060 ACLA_002060 ACLA_003480 ACLA_003480 ACLA_003560 ACLA_003560 ACLA_003700 ACLA_003700 dbp3 dbp3 ACLA_068380 ACLA_068380 ACLA_068400 ACLA_068400 dbp2 dbp2 ACLA_070340 ACLA_070340 ACLA_070470 ACLA_070470 ACLA_070760 ACLA_070760 ACLA_071030 ACLA_071030 ACLA_071550 ACLA_071550 ACLA_071700 ACLA_071700 ACLA_071710 ACLA_071710 ACLA_073430 ACLA_073430 ACLA_073520 ACLA_073520 dbp9 dbp9 ACLA_074090 ACLA_074090 ACLA_075010 ACLA_075010 ACLA_075070 ACLA_075070 ACLA_075660 ACLA_075660 esf2 esf2 ACLA_075730 ACLA_075730 ACLA_076020 ACLA_076020 ACLA_076030 ACLA_076030 cgrA cgrA ACLA_008990 ACLA_008990 ACLA_009190 ACLA_009190 TIF6 TIF6 ACLA_009510 ACLA_009510 ACLA_009840 ACLA_009840 ACLA_009850 ACLA_009850 ACLA_010660 ACLA_010660 ACLA_010850 ACLA_010850 ACLA_010920 ACLA_010920 ACLA_010990 ACLA_010990 ACLA_013690 ACLA_013690 dbp7 dbp7 ACLA_014620 ACLA_014620 ACLA_014790 ACLA_014790 SPB1 SPB1 ACLA_015290 ACLA_015290 ACLA_015310 ACLA_015310 ACLA_016450 ACLA_016450 ACLA_016480 ACLA_016480 ACLA_060510 ACLA_060510 ACLA_060600 ACLA_060600 ACLA_060670 ACLA_060670 pxr1 pxr1 ACLA_005920 ACLA_005920 ACLA_006140 ACLA_006140 ACLA_006280 ACLA_006280 ACLA_006380 ACLA_006380 ACLA_006550 ACLA_006550 ACLA_007150 ACLA_007150 ACLA_007340 ACLA_007340 ACLA_008170 ACLA_008170 ACLA_088160 ACLA_088160 ACLA_088200 ACLA_088200 jip5 jip5 ACLA_089150 ACLA_089150 ACLA_089280 ACLA_089280 ACLA_089860 ACLA_089860 ACLA_089880 ACLA_089880 ACLA_090130 ACLA_090130 ACLA_090570 ACLA_090570 ACLA_091190 ACLA_091190 ACLA_092080 ACLA_092080 ACLA_092270 ACLA_092270 ACLA_092840 ACLA_092840 ACLA_093100 ACLA_093100 nop16 nop16 ACLA_064950 ACLA_064950 ACLA_065320 ACLA_065320 ACLA_045150 ACLA_045150 ACLA_045570 ACLA_045570 ACLA_045660 ACLA_045660 ACLA_046390 ACLA_046390 ACLA_046810 ACLA_046810 ACLA_046850 ACLA_046850 ACLA_046880 ACLA_046880 ytm1 ytm1 nop7 nop7 ACLA_048310 ACLA_048310 ACLA_049750 ACLA_049750 ACLA_051140 ACLA_051140 trm8 trm8 ACLA_051720 ACLA_051720 has1 has1 ACLA_052640 ACLA_052640 ACLA_033500 ACLA_033500 ACLA_033810 ACLA_033810 ACLA_033960 ACLA_033960 ACLA_034270 ACLA_034270 ACLA_035670 ACLA_035670 nsa2 nsa2 ACLA_036370 ACLA_036370 ACLA_036990 ACLA_036990 ACLA_037260 ACLA_037260 ACLA_037370 ACLA_037370 ACLA_037520 ACLA_037520 ACLA_037680 ACLA_037680 dbp8 dbp8 nop9 nop9 spb4 spb4 ACLA_041050 ACLA_041050 nop58 nop58 ACLA_095240 ACLA_095240 loc1 loc1 rrp36 rrp36 ACLA_096270 ACLA_096270 ACLA_096580 ACLA_096580 ACLA_096940 ACLA_096940 ACLA_018420 ACLA_018420 ACLA_018570 ACLA_018570 ACLA_019050 ACLA_019050 ACLA_019230 ACLA_019230 rok1 rok1 ACLA_019750 ACLA_019750 ACLA_020320 ACLA_020320 drs1 drs1 dus3 dus3 ACLA_020850 ACLA_020850 ACLA_021200 ACLA_021200 ACLA_021230 ACLA_021230 ACLA_021580 ACLA_021580 ACLA_021850 ACLA_021850 ACLA_022250 ACLA_022250 ACLA_022400 ACLA_022400 ACLA_024390 ACLA_024390 ACLA_024520 ACLA_024520 ACLA_024760 ACLA_024760 ACLA_024970 ACLA_024970 ACLA_025090 ACLA_025090 utp25 utp25 ACLA_026260 ACLA_026260 erb1 erb1 chz1 chz1 TSR3 TSR3 ACLA_027970 ACLA_027970 ACLA_028250 ACLA_028250 rrp3 rrp3 ACLA_028290 ACLA_028290 ACLA_028350 ACLA_028350 ACLA_029250 ACLA_029250 NAT10 NAT10 trm82 trm82 ACLA_029830 ACLA_029830 ACLA_030280 ACLA_030280 ACLA_030400 ACLA_030400 ACLA_031710 ACLA_031710 ACLA_031780 ACLA_031780 ACLA_031800 ACLA_031800 ACLA_032220 ACLA_032220 ACLA_032230 ACLA_032230 ACLA_032520 ACLA_032520 ACLA_080150 ACLA_080150 ACLA_080300 ACLA_080300 ACLA_081040 ACLA_081040 ACLA_081660 ACLA_081660 ACLA_082430 ACLA_082430 ACLA_083030 ACLA_083030 ACLA_083490 ACLA_083490 mak5 mak5 ACLA_084030 ACLA_084030 ACLA_084470 ACLA_084470 dbp4 dbp4 dbp10 dbp10 ACLA_086170 ACLA_086170 utp10 utp10 ACLA_087370 ACLA_087370
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
ACLA_057570rRNA maturation protein (Nop14), putative. (913 aa)
ACLA_057760RNA binding protein, putative. (536 aa)
ACLA_058040RNA-3'-phosphate cyclase family protein. (405 aa)
ACLA_058190Ribosome biogenesis protein, putative. (330 aa)
ACLA_058850Ribosome biogenesis protein Noc4, putative. (548 aa)
ACLA_001170Nop10 family nucleolar RNA-binding protein. (66 aa)
ACLA_00118020S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (438 aa)
ACLA_001250DUF1665 domain protein. (298 aa)
ACLA_002060Small nucleolar ribonucleoprotein complex subunit (Pwp2), putative. (902 aa)
ACLA_003480Eukaryotic translation initiation factor 3, gamma subunit, putative. (577 aa)
ACLA_003560Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (755 aa)
ACLA_003700Dual specificity phosphatase, catalytic domain protein. (216 aa)
dbp3ATP-dependent RNA helicase dbp3; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity); Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily. (503 aa)
ACLA_068380Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
ACLA_068400Small nucleolar ribonucleoprotein complex subunit, putative. (623 aa)
dbp2ATP-dependent RNA helicase dbp2; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. (549 aa)
ACLA_070340KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (354 aa)
ACLA_070470Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (655 aa)
ACLA_070760Pre-rRNA processing protein Rrp12, putative. (1276 aa)
ACLA_071030Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4925 aa)
ACLA_071550Von Willebrand domain protein. (859 aa)
ACLA_071700Pre-rRNA processing protein Tsr1, putative. (805 aa)
ACLA_071710Small nucleolar ribonucleoprotein complex subunit, putative. (528 aa)
ACLA_073430HEAT repeat protein. (1642 aa)
ACLA_073520Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (566 aa)
dbp9ATP-dependent RNA helicase dbp9; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX56/DBP9 subfamily. (621 aa)
ACLA_074090Ribosome biogenesis protein (Bms1), putative. (1181 aa)
ACLA_075010rRNA biogenesis protein RRP5, putative. (1819 aa)
ACLA_075070Telomere-binding protein alpha subunit, central domain, putative. (619 aa)
ACLA_07566060S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (533 aa)
esf2Pre-rRNA-processing protein esf2; Involved in the small subunit (SSU) processome assembly and function, and in the 18S rRNA synthesis. Required for the early cleavages at sites A0, A1 and A2 (By similarity); Belongs to the ESF2/ABP1 family. (368 aa)
ACLA_075730Curved DNA-binding protein (42 kDa protein). (408 aa)
ACLA_076020Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (692 aa)
ACLA_07603060S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (207 aa)
cgrArRNA-processing protein cgrA; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit; Belongs to the CGR1 family. (113 aa)
ACLA_008990Centromere/microtubule binding protein cbf5. (487 aa)
ACLA_009190RNA processing factor 1. (436 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (247 aa)
ACLA_009510Uncharacterized protein. (297 aa)
ACLA_009840Ribosome biogenesis GTPase Lsg1, putative. (679 aa)
ACLA_009850Low-temperature viability protein ltv1. (497 aa)
ACLA_01066060S ribosome biogenesis protein Sqt1, putative. (512 aa)
ACLA_010850RNA 3'-terminal phosphate cyclase, putative. (464 aa)
ACLA_010920tRNA methyltransferase subunit GCD14, putative. (505 aa)
ACLA_010990Ankyrin repeat protein (Yar1), putative. (238 aa)
ACLA_013690Uncharacterized protein. (1125 aa)
dbp7ATP-dependent RNA helicase dbp7; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs. (755 aa)
ACLA_014620tRNA(M5U54)methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (579 aa)
ACLA_014790RIO1 family protein kinase, putative. (422 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (796 aa)
ACLA_015290rRNA processing protein (Ebp2), putative. (371 aa)
ACLA_015310Pseudouridine synthase. (412 aa)
ACLA_016450Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (248 aa)
ACLA_016480Uncharacterized protein. (329 aa)
ACLA_060510SnoRNA binding protein, putative. (770 aa)
ACLA_060600N2,N2-dimethylguanosine tRNA methyltransferase, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (1045 aa)
ACLA_060670rRNA processing protein Bystin, putative. (516 aa)
pxr1Protein pxr1; Involved in rRNA-processing at A0, A1 and A2 sites and regulates negatively telomerase; Belongs to the PINX1 family. (291 aa)
ACLA_005920Uncharacterized protein. (222 aa)
ACLA_006140Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (220 aa)
ACLA_006280Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1235 aa)
ACLA_006380Conserved hypothetical portein. (523 aa)
ACLA_006550rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (393 aa)
ACLA_007150Uncharacterized protein. (404 aa)
ACLA_007340F-box domain protein. (979 aa)
ACLA_008170BNR/Asp-box repeat domain protein. (365 aa)
ACLA_088160Methyltransferase, putative. (279 aa)
ACLA_088200rRNA processing protein (Rrp20), putative. (260 aa)
jip5WD repeat-containing protein jip5. (414 aa)
ACLA_089150Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (429 aa)
ACLA_089280Pre-rRNA processing protein Esf1, putative. (740 aa)
ACLA_089860Pre-rRNA processing protein, putative. (197 aa)
ACLA_089880WD repeat protein. (720 aa)
ACLA_090130C2H2 finger domain protein, putative. (441 aa)
ACLA_090570Small nucleolar ribonucleoprotein complex subunit, putative. (983 aa)
ACLA_091190DUF652 domain protein. (201 aa)
ACLA_09208060S ribosomal protein L24b. (188 aa)
ACLA_092270Casein kinase I, putative; Belongs to the protein kinase superfamily. (401 aa)
ACLA_092840Nuclear protein (Sgd1), putative. (865 aa)
ACLA_093100Small nucleolar ribonucleoprotein complex subunit Utp15, putative. (542 aa)
nop16Nucleolar protein 16; Involved in the biogenesis of the 60S ribosomal subunit. (241 aa)
ACLA_064950WD domain protein. (930 aa)
ACLA_065320Uncharacterized protein. (306 aa)
ACLA_045150U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (715 aa)
ACLA_045570Ribosome biogenesis (Nop4), putative. (735 aa)
ACLA_045660Ribosomal biogenesis protein Gar2. (489 aa)
ACLA_046390Dual specificity phosphatase, putative. (350 aa)
ACLA_046810Small nucleolar ribonucleoprotein complex subunit, putative. (617 aa)
ACLA_046850Small nucleolar ribonucleoprotein complex subunit, putative. (978 aa)
ACLA_04688060S ribosome biogenesis protein Mak11, putative. (515 aa)
ytm1Ribosome biogenesis protein ytm1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (488 aa)
nop7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (680 aa)
ACLA_048310Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (560 aa)
ACLA_049750Small nucleolar ribonucleoprotein complex component (Utp5), putative. (851 aa)
ACLA_051140RNA methylase family protein. (480 aa)
trm8tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (339 aa)
ACLA_051720tRNA (Adenine-N(1)-)-methyltransferase. (443 aa)
has1ATP-dependent RNA helicase has1; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA. (625 aa)
ACLA_052640H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (205 aa)
ACLA_033500U3 small nucleolar RNA-associated protein 22. (1075 aa)
ACLA_033810RNA binding protein Rnp24, putative. (376 aa)
ACLA_033960RNA processing protein Emg1, putative. (254 aa)
ACLA_034270RNA binding protein. (329 aa)
ACLA_035670Ribonucleoprotein, chloroplast. (514 aa)
nsa2Ribosome biogenesis protein nsa2; Involved in the biogenesis of the 60S ribosomal subunit. May play a part in the quality control of pre-60S particles (By similarity). (265 aa)
ACLA_036370tRNA dihydrouridine synthase (Smm1), putative. (444 aa)
ACLA_036990Uncharacterized protein. (178 aa)
ACLA_037260PDCD2_C domain protein, putative. (428 aa)
ACLA_037370Pre-rRNA processing nucleolar protein Sik1, putative. (515 aa)
ACLA_037520Uncharacterized protein. (396 aa)
ACLA_037680AB hydrolase-1 domain-containing protein. (342 aa)
dbp8ATP-dependent RNA helicase dbp8; ATP-binding RNA helicase involved in 40S ribosomal subunit biogenesis and is required for the normal formation of 18S rRNAs through pre-rRNA processing at A0, A1 and A2 sites. Required for vegetative growth (By similarity); Belongs to the DEAD box helicase family. DDX49/DBP8 subfamily. (523 aa)
nop9Nucleolar protein 9; RNA-binding nucleolar protein required for pre-rRNA processing. Involved in production of 18S rRNA and assembly of small ribosomal subunit (By similarity); Belongs to the NOP9 family. (692 aa)
spb4ATP-dependent rRNA helicase spb4; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits. Binds 90S pre-ribosomal particles and dissociates from pre-60S ribosomal particles after processing of 27SB pre-rRNA. Required for the normal formation of 18S rRNA through the processing of pre-rRNAs at sites A0, A1 and A2, and the normal formation of 25S and 5.8S rRNAs through the processing of pre-rRNAs at sites C1 and C2. (639 aa)
ACLA_041050Pseudouridylate synthase 3. (604 aa)
nop58Nucleolar protein 58; Required for pre-18S rRNA processing. May bind microtubules (By similarity); Belongs to the NOP5/NOP56 family. (592 aa)
ACLA_095240Nucleolus protein required for cell viability, putative. (242 aa)
loc160S ribosomal subunit assembly/export protein loc1; Required for efficient assembly and nuclear export of the 60S ribosomal subunit. (190 aa)
rrp36rRNA biogenesis protein rrp36; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity). (379 aa)
ACLA_096270DEAH-box RNA helicase (Dhr1), putative. (1219 aa)
ACLA_096580Protein MAK16; Belongs to the MAK16 family. (323 aa)
ACLA_096940mRNA-nucleus export ATPase (Elf1), putative. (1108 aa)
ACLA_018420NOL1/NOP2/sun domain protein, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (565 aa)
ACLA_018570DEAD/DEAH box helicase, putative. (848 aa)
ACLA_019050Dihydrouridine synthase family protein, putative. (538 aa)
ACLA_019230Ribosome assembly protein Noc2, putative. (785 aa)
rok1ATP-dependent RNA helicase rok1; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA. (738 aa)
ACLA_019750DEAD box RNA helicase HelA, putative; Belongs to the DEAD box helicase family. (663 aa)
ACLA_020320Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (747 aa)
drs1ATP-dependent RNA helicase drs1; ATP-binding RNA helicase involved in ribosome assembly. (826 aa)
dus3tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs (By similarity). (728 aa)
ACLA_020850U3 small nucleolar RNA-associated protein Utp11, putative. (303 aa)
ACLA_021200Fibrillarin. (318 aa)
ACLA_021230Methyltransferase (Ncl1), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (891 aa)
ACLA_021580snoRNP assembly factor Naf1, putative. (677 aa)
ACLA_021850Small nuclear ribonucleoprotein complex protein Nhp2, putative. (233 aa)
ACLA_022250Urb2 domain-containing protein. (1482 aa)
ACLA_022400U3 small nucleolar ribonucleoprotein protein IMP4, putative. (299 aa)
ACLA_024390Sas10/Utp3 family protein. (657 aa)
ACLA_024520Ribosomal RNA processing protein, putative. (332 aa)
ACLA_024760CCAAT-box-binding transcription factor. (1104 aa)
ACLA_024970GTP-binding protein. (549 aa)
ACLA_025090PUM-HD domain-containing protein. (699 aa)
utp25U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (693 aa)
ACLA_026260AAA family ATPase/60S ribosome export protein Rix7, putative. (738 aa)
erb1Ribosome biogenesis protein erb1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (788 aa)
chz1Histone H2A.Z-specific chaperone chz1; Forms a chaperone-bound H2A.Z-H2B complex that acts as a source for SWR1 complex-dependent H2A to H2A.Z histone replacement in chromatin. (115 aa)
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (375 aa)
ACLA_02797060S ribosome biogenesis protein Rrp14, putative. (533 aa)
ACLA_028250Protein arginine n-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (352 aa)
rrp3ATP-dependent rRNA helicase rrp3; ATP-dependent rRNA helicase required for pre-ribosomal RNA processing. Involved in the maturation of the 35S-pre-rRNA and to its cleavage to mature 18S rRNA. (473 aa)
ACLA_028290Ribosome biogenesis protein Ssf2, putative. (442 aa)
ACLA_028350Small nucleolar ribonucleoprotein complex subunit (SOF1), putative. (466 aa)
ACLA_029250Ribosome biogenesis protein Kri1. (627 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1068 aa)
trm82tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit trm82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (495 aa)
ACLA_029830Pre-rRNA processing protein Mrd1, putative. (822 aa)
ACLA_030280Small nucleolar ribonucleoprotein complex subunit Utp14, putatrive. (959 aa)
ACLA_030400SRP40, C-terminal domain protein. (442 aa)
ACLA_031710WD domain protein. (959 aa)
ACLA_031780rRNA processing protein Pwp1, putative. (545 aa)
ACLA_031800rRNA processing protein, putative. (329 aa)
ACLA_03222060S ribosome biogenesis protein Brx1, putative. (357 aa)
ACLA_032230F-box domain protein. (371 aa)
ACLA_032520WD repeat protein. (516 aa)
ACLA_080150U3 small nucleolar ribonucleoprotein subunit (Imp3), putative. (188 aa)
ACLA_080300tRNA pseudouridine synthase, putative. (568 aa)
ACLA_081040ATP-dependent RNA helicase (Hrh1), putative. (826 aa)
ACLA_081660WD repeat protein. (1163 aa)
ACLA_082430HEAT repeat protein (DRIM), putative. (2621 aa)
ACLA_083030Transcription factor AATF/Che-1, putative. (579 aa)
ACLA_083490Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (428 aa)
mak5ATP-dependent RNA helicase mak5; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX24/MAK5 subfamily. (774 aa)
ACLA_084030Ribosome biogenesis protein (Rrb1), putative. (496 aa)
ACLA_084470Uncharacterized protein. (274 aa)
dbp4ATP-dependent RNA helicase dbp4; ATP-dependent RNA helicase required for ribosome biogenesis. Involved in the release of U14 snoRNA in pre-ribosomal complexes. Required for pre-rRNA cleavage at site A2 (By similarity). (823 aa)
dbp10ATP-dependent RNA helicase dbp10; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (935 aa)
ACLA_086170C2H2 finger domain protein, putative. (111 aa)
utp10U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity). (1819 aa)
ACLA_087370U3 small nucleolar ribonucleoprotein protein Lcp5, putative. (385 aa)
Your Current Organism:
Aspergillus clavatus
NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1
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