STRINGSTRING
ACLA_057570 ACLA_057570 ACLA_058040 ACLA_058040 ACLA_058850 ACLA_058850 ACLA_002060 ACLA_002060 ACLA_068380 ACLA_068380 ACLA_068400 ACLA_068400 ACLA_070340 ACLA_070340 ACLA_071710 ACLA_071710 ACLA_074090 ACLA_074090 ACLA_075010 ACLA_075010 ACLA_009510 ACLA_009510 ACLA_010850 ACLA_010850 ACLA_060510 ACLA_060510 ACLA_089880 ACLA_089880 ACLA_090570 ACLA_090570 ACLA_091190 ACLA_091190 ACLA_093100 ACLA_093100 ACLA_064950 ACLA_064950 ACLA_065320 ACLA_065320 ACLA_045150 ACLA_045150 ACLA_046810 ACLA_046810 ACLA_046850 ACLA_046850 ACLA_049750 ACLA_049750 ACLA_033500 ACLA_033500 ACLA_033960 ACLA_033960 ACLA_037370 ACLA_037370 ACLA_037520 ACLA_037520 nop58 nop58 ACLA_095240 ACLA_095240 ACLA_096270 ACLA_096270 ACLA_096940 ACLA_096940 ACLA_020850 ACLA_020850 ACLA_021200 ACLA_021200 ACLA_022400 ACLA_022400 ACLA_024390 ACLA_024390 utp25 utp25 ACLA_028350 ACLA_028350 NAT10 NAT10 ACLA_030280 ACLA_030280 ACLA_031710 ACLA_031710 ACLA_080150 ACLA_080150 ACLA_082430 ACLA_082430 ACLA_083030 ACLA_083030 utp10 utp10 ACLA_087370 ACLA_087370
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACLA_057570rRNA maturation protein (Nop14), putative. (913 aa)
ACLA_058040RNA-3'-phosphate cyclase family protein. (405 aa)
ACLA_058850Ribosome biogenesis protein Noc4, putative. (548 aa)
ACLA_002060Small nucleolar ribonucleoprotein complex subunit (Pwp2), putative. (902 aa)
ACLA_068380Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
ACLA_068400Small nucleolar ribonucleoprotein complex subunit, putative. (623 aa)
ACLA_070340KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (354 aa)
ACLA_071710Small nucleolar ribonucleoprotein complex subunit, putative. (528 aa)
ACLA_074090Ribosome biogenesis protein (Bms1), putative. (1181 aa)
ACLA_075010rRNA biogenesis protein RRP5, putative. (1819 aa)
ACLA_009510Uncharacterized protein. (297 aa)
ACLA_010850RNA 3'-terminal phosphate cyclase, putative. (464 aa)
ACLA_060510SnoRNA binding protein, putative. (770 aa)
ACLA_089880WD repeat protein. (720 aa)
ACLA_090570Small nucleolar ribonucleoprotein complex subunit, putative. (983 aa)
ACLA_091190DUF652 domain protein. (201 aa)
ACLA_093100Small nucleolar ribonucleoprotein complex subunit Utp15, putative. (542 aa)
ACLA_064950WD domain protein. (930 aa)
ACLA_065320Uncharacterized protein. (306 aa)
ACLA_045150U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (715 aa)
ACLA_046810Small nucleolar ribonucleoprotein complex subunit, putative. (617 aa)
ACLA_046850Small nucleolar ribonucleoprotein complex subunit, putative. (978 aa)
ACLA_049750Small nucleolar ribonucleoprotein complex component (Utp5), putative. (851 aa)
ACLA_033500U3 small nucleolar RNA-associated protein 22. (1075 aa)
ACLA_033960RNA processing protein Emg1, putative. (254 aa)
ACLA_037370Pre-rRNA processing nucleolar protein Sik1, putative. (515 aa)
ACLA_037520Uncharacterized protein. (396 aa)
nop58Nucleolar protein 58; Required for pre-18S rRNA processing. May bind microtubules (By similarity); Belongs to the NOP5/NOP56 family. (592 aa)
ACLA_095240Nucleolus protein required for cell viability, putative. (242 aa)
ACLA_096270DEAH-box RNA helicase (Dhr1), putative. (1219 aa)
ACLA_096940mRNA-nucleus export ATPase (Elf1), putative. (1108 aa)
ACLA_020850U3 small nucleolar RNA-associated protein Utp11, putative. (303 aa)
ACLA_021200Fibrillarin. (318 aa)
ACLA_022400U3 small nucleolar ribonucleoprotein protein IMP4, putative. (299 aa)
ACLA_024390Sas10/Utp3 family protein. (657 aa)
utp25U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (693 aa)
ACLA_028350Small nucleolar ribonucleoprotein complex subunit (SOF1), putative. (466 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1068 aa)
ACLA_030280Small nucleolar ribonucleoprotein complex subunit Utp14, putatrive. (959 aa)
ACLA_031710WD domain protein. (959 aa)
ACLA_080150U3 small nucleolar ribonucleoprotein subunit (Imp3), putative. (188 aa)
ACLA_082430HEAT repeat protein (DRIM), putative. (2621 aa)
ACLA_083030Transcription factor AATF/Che-1, putative. (579 aa)
utp10U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity). (1819 aa)
ACLA_087370U3 small nucleolar ribonucleoprotein protein Lcp5, putative. (385 aa)
Your Current Organism:
Aspergillus clavatus
NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1
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