STRINGSTRING
ACLA_058350 ACLA_058350 ACLA_058730 ACLA_058730 ACLA_058910 ACLA_058910 ACLA_001500 ACLA_001500 ACLA_001520 ACLA_001520 ACLA_001850 ACLA_001850 ACLA_003930 ACLA_003930 ACLA_072610 ACLA_072610 ACLA_073350 ACLA_073350 ACLA_074620 ACLA_074620 ACLA_074630 ACLA_074630 ACLA_014550 ACLA_014550 ACLA_060570 ACLA_060570 ACLA_061950 ACLA_061950 ACLA_052110 ACLA_052110 ACLA_034050 ACLA_034050 ACLA_035630 ACLA_035630 ACLA_035980 ACLA_035980 ACLA_036000 ACLA_036000 ACLA_038510 ACLA_038510 ACLA_041900 ACLA_041900 ACLA_042010 ACLA_042010 ACLA_020630 ACLA_020630 ACLA_020830 ACLA_020830 ACLA_021550 ACLA_021550 ACLA_023760 ACLA_023760 ACLA_026140 ACLA_026140 ACLA_030120 ACLA_030120 ACLA_031570 ACLA_031570 ACLA_080290 ACLA_080290 ACLA_080350 ACLA_080350 ACLA_083810 ACLA_083810 ACLA_086380 ACLA_086380
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACLA_058350Uncharacterized protein. (1269 aa)
ACLA_058730RNA polymerase II subunit 7. (169 aa)
ACLA_058910Transcription initiation factor iif, beta subunit. (374 aa)
ACLA_001500Transcription initiation factor TFIID complex 60 kDa subunit. (448 aa)
ACLA_001520Transcription initiation factor TFIID subunit beta, putative. (521 aa)
ACLA_001850TFIIH complex helicase Ssl2, putative. (823 aa)
ACLA_003930Copper fist DNA binding domain protein. (92 aa)
ACLA_072610Transcription initiation factor TFIID subunit 7, putative. (484 aa)
ACLA_073350Histone-like transcription factor (CBF/NF-Y), putative. (246 aa)
ACLA_074620Uncharacterized protein. (360 aa)
ACLA_074630Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
ACLA_014550Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (286 aa)
ACLA_060570Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (717 aa)
ACLA_061950CBF/NF-Y family transcription factor, putative. (142 aa)
ACLA_052110Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (767 aa)
ACLA_034050Transcription initiation factor TFIID subunit 12, putative. (630 aa)
ACLA_035630Transcription elongation factor S-II. (304 aa)
ACLA_035980Polymerase (RNA) II (DNA directed) polypeptide D. (148 aa)
ACLA_036000C6 transcription factor (OTam), putative. (663 aa)
ACLA_038510Transcription initiation protein. (350 aa)
ACLA_041900Bromodomain associated protein. (348 aa)
ACLA_042010DNA repair protein Rex1, putative. (72 aa)
ACLA_020630Transcription factor TFIIA complex subunit Toa1, putative. (402 aa)
ACLA_020830Transcription initiation factor TFIID, 31kD subunit, putative. (313 aa)
ACLA_021550TFIIH complex helicase Rad3, putative. (771 aa)
ACLA_023760DUF4211 domain-containing protein. (463 aa)
ACLA_026140Transcription initiation factor TFIID subunit 13, putative. (170 aa)
ACLA_030120HMG box protein, putative. (305 aa)
ACLA_031570Transcription initiation factor TFIID subunit, putative. (744 aa)
ACLA_080290Transcription factor TFIIE complex alpha subunit, putative. (452 aa)
ACLA_080350DNA directed RNA polymerase II 15 kDa subunit, putative. (122 aa)
ACLA_083810Transcription factor TFIID complex 145 kDa subunit, putative. (1113 aa)
ACLA_086380Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (294 aa)
Your Current Organism:
Aspergillus clavatus
NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1
Server load: low (38%) [HD]
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