Your Input: | |
| | ACLA_043960 | Uncharacterized protein. (227 aa) |
| | ACLA_058730 | RNA polymerase II subunit 7. (169 aa) |
| | ACLA_058900 | CCCH zinc finger protein. (452 aa) |
| | ACLA_000540 | RNase3 domain protein. (228 aa) |
| | ACLA_000790 | Pumilio-family RNA binding repeat protein. (771 aa) |
| | ACLA_000990 | Molecular chaperone Mod-E/Hsp90. (703 aa) |
| | ACLA_002030 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1408 aa) |
| | ACLA_002640 | DNA helicase; Belongs to the MCM family. (719 aa) |
| | ACLA_003280 | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (805 aa) |
| | HTZ1 | Histone H2A.Z; Variant histone H2A which can replace H2A in some nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. This variant is enriched at promoters, it may keep them in a repressed state until the appropriate activa [...] (138 aa) |
| | ACLA_003320 | R3H domain protein, putative. (607 aa) |
| | ACLA_068430 | SIR2 family histone deacetylase, putative. (424 aa) |
| | ACLA_069040 | DEAD/DEAH box RNA helicase (Ski2), putative. (1292 aa) |
| | MCM7 | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (811 aa) |
| | ACLA_069520 | 50S ribosomal protein L13. (166 aa) |
| | dbp2 | ATP-dependent RNA helicase dbp2; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. (549 aa) |
| | ACLA_069970 | Uncharacterized protein. (560 aa) |
| | ACLA_070740 | Uncharacterized protein. (292 aa) |
| | LSM1 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (177 aa) |
| | LSM4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (119 aa) |
| | ACLA_070920 | Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (514 aa) |
| | ACLA_071950 | 3' exoribonuclease family protein (Rrp42), putative. (391 aa) |
| | ACLA_071970 | Stc1 domain-containing protein. (281 aa) |
| | ACLA_071980 | Uncharacterized protein. (684 aa) |
| | ACLA_072770 | Arsenite resistance protein Ars2, putative. (916 aa) |
| | ACLA_072960 | RNA-dependent RNA polymerase. (1203 aa) |
| | ACLA_075530 | Protein kinase, putative. (781 aa) |
| | ACLA_075760 | Endonuclease/exonuclease/phosphatase family protein. (344 aa) |
| | ACLA_075910 | CAF1 family ribonuclease, putative. (578 aa) |
| | ACLA_076160 | AAA family ATPase, putative. (2325 aa) |
| | ACLA_092560 | Uncharacterized protein. (382 aa) |
| | ACLA_092760 | CCR4-NOT transcription complex, subunit 3. (617 aa) |
| | ACLA_093550 | Exosome complex subunit Rrp46, putative. (249 aa) |
| | ACLA_066090 | Cap binding protein; Belongs to the eukaryotic initiation factor 4E family. (246 aa) |
| | ACLA_066210 | Uncharacterized protein. (421 aa) |
| | ded1 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. (681 aa) |
| | ACLA_049050 | Histone acetyltransferase subunit (Yaf9), putative. (252 aa) |
| | ACLA_050040 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1081 aa) |
| | ACLA_051130 | Chromatin regulatory protein sir2. (492 aa) |
| | ACLA_051250 | Exosome complex exonuclease exoribonuclease (Rrp44), putative; Belongs to the RNR ribonuclease family. (1032 aa) |
| | ACLA_051380 | Cell differentiation protein (Rcd1), putative. (406 aa) |
| | ccr4 | Glucose-repressible alcohol dehydrogenase transcriptional effector; Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. Ccr4 has 3'-5' RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single-stranded DNA. Discovered because of its role in the control of ADH2 gene expression. It is required for the expression of genes involved in non-fermentative growth (By similarity); Belongs to [...] (667 aa) |
| | ACLA_051780 | Puatative oxidoreductase. (338 aa) |
| | ACLA_052000 | Flavin-containing amine oxidase, putative. (1071 aa) |
| | ACLA_052150 | G-protein comlpex beta subunit CpcB. (316 aa) |
| | ACLA_052240 | Zinc knuckle domain protein. (632 aa) |
| | ACLA_052420 | Chromatin remodeling complex subunit (Chd3), putative. (1522 aa) |
| | hta1 | Histone H2A; Core component of nucleosome which plays a central role in DNA double strand break (DSB) repair. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (133 aa) |
| | dhh1 | ATP-dependent RNA helicase dhh1; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping. Is involved in G1/S DNA-damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs. May also have a role in translation and mRNA nuclear export (By similarity); Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. (503 aa) |
| | ACLA_033830 | Exosome complex exonuclease Rrp4, putative. (387 aa) |
| | ACLA_034330 | Exosome-associated protein, putative. (249 aa) |
| | ACLA_034760 | RNA-dependent RNA polymerase. (1428 aa) |
| | ACLA_035140 | DEAD/DEAH box RNA helicase, putative; Belongs to the DEAD box helicase family. (584 aa) |
| | ACLA_035980 | Polymerase (RNA) II (DNA directed) polypeptide D. (148 aa) |
| | ACLA_036380 | SNF2 family helicase/ATPase, putative. (1131 aa) |
| | ACLA_036780 | Antiviral protein (Ski3), putative. (1414 aa) |
| | ACLA_037380 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (361 aa) |
| | ACLA_037720 | Exosome complex exonuclease Rrp6, putative. (778 aa) |
| | ACLA_038100 | Ccr4-Not transcription complex subunit (NOT1), putative. (2346 aa) |
| | ACLA_039900 | PHD transcription factor, putative. (862 aa) |
| | ACLA_041200 | Uncharacterized protein. (162 aa) |
| | ACLA_095270 | RRM_2 domain-containing protein. (596 aa) |
| | ACLA_095410 | Cap binding protein. (848 aa) |
| | ACLA_095480 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (472 aa) |
| | ACLA_095490 | HLA class III protein Dom3z. (356 aa) |
| | ACLA_096290 | mRNA binding protein Pumilio 2, putative. (908 aa) |
| | sub2 | ATP-dependent RNA helicase sub2; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity); Belongs to the DEAD box helicase family. DECD subfamily. (441 aa) |
| | ACLA_098200 | Ribonuclease P complex subunit Pop1, putative. (896 aa) |
| | ACLA_098310 | 3' exoribonuclease family protein. (416 aa) |
| | ACLA_018080 | Stress responsive A/B barrel domain protein. (113 aa) |
| | ACLA_018510 | Sin3-associated polypeptide Sap18, putative. (269 aa) |
| | ACLA_019990 | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (598 aa) |
| | ACLA_020730 | WD domain protein. (481 aa) |
| | pan3 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein pab1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (659 aa) |
| | ACLA_021120 | Small nuclear ribonucleoprotein (LSM7), putative. (140 aa) |
| | ACLA_021710 | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1043 aa) |
| | ACLA_022410 | Regulator of nonsense transcripts, putative. (1079 aa) |
| | ACLA_022880 | Stress responsive A/B barrel domain protein. (100 aa) |
| | ACLA_023090 | G2/M phase checkpoint control protein Sum2, putative. (574 aa) |
| | ACLA_023580 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. (480 aa) |
| | ACLA_024250 | Cell wall biogenesis protein phosphatase Ssd1, putative. (1316 aa) |
| | ACLA_024790 | Uncharacterized protein. (789 aa) |
| | ACLA_024830 | TMF_TATA_bd domain-containing protein. (876 aa) |
| | ACLA_024990 | SIR2 family histone deacetylase (Hst4), putative. (571 aa) |
| | ACLA_025090 | PUM-HD domain-containing protein. (699 aa) |
| | ACLA_026410 | RXT2_N domain-containing protein. (513 aa) |
| | ACLA_026620 | WD domain protein. (404 aa) |
| | ACLA_027490 | Uncharacterized protein. (1524 aa) |
| | ACLA_028320 | PHD finger domain protein, putative. (595 aa) |
| | ACLA_028610 | 60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (202 aa) |
| | ACLA_029650 | SAM domain protein. (613 aa) |
| | ACLA_029690 | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa) |
| | ACLA_030670 | DNA helicase; Belongs to the MCM family. (887 aa) |
| | ACLA_031430 | RNA binding protein. (456 aa) |
| | ACLA_031910 | RNA-binding protein, putative. (1002 aa) |
| | ACLA_032250 | Chromo domain protein. (1200 aa) |
| | ACLA_080400 | Nuclear cap-binding protein subunit 2. (138 aa) |
| | ACLA_080700 | Exosome complex endonuclease 2/ribosomal RNA processing protein, putative. (292 aa) |
| | ACLA_080820 | Eukaryotic translation initiation factor 5, putative. (423 aa) |
| | ACLA_081710 | Chromo domain protein. (248 aa) |
| | ACLA_082240 | RNA binding protein Pym, putative. (215 aa) |
| | ACLA_082290 | WD repeat protein. (534 aa) |
| | ACLA_082900 | Smr domain protein. (557 aa) |
| | ACLA_083590 | CCR4-NOT core complex subunit Not4, putative. (1579 aa) |
| | ACLA_084370 | Rpp14 family family. (218 aa) |
| | ACLA_084670 | UV-damaged DNA binding protein, putative. (1140 aa) |
| | ACLA_085130 | Nonsense-mediated mRNA decay protein Upf3, putative. (580 aa) |
| | ACLA_085550 | RNP domain protein. (419 aa) |
| | cla | Ribonuclease clavin; Clavin has the same substrate specificity as alpha-sarcin. It is specific for purines in both single- and double-stranded RNA. Its toxic action on eukaryotic cells is the result of cleavage of a single phosphodiester bond in the 60S subunit of ribosomes. Belongs to the ribonuclease U2 family. (177 aa) |
| | ACLA_054620 | Uncharacterized protein. (297 aa) |
| | dcl2 | ATP-dependent helicase dcl2; Dicer-like endonuclease involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. Produces 21 to 25 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs leading to sequence-specific suppression of gene expression, called post-transcriptional gene silencing (PTGS). Part of a broad host defense response against viral infection and transposons (By similarity); Belongs to the helicase family. Dicer subfamily. (1389 aa) |
| | ACLA_009060 | Ubiquitin ligase subunit HrtA, putative. (120 aa) |
| | ACLA_009160 | Non-specific serine/threonine protein kinase. (841 aa) |
| | ino80 | Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair. (1707 aa) |
| | ACLA_010640 | CCR4-NOT core complex subunit Caf1, putative. (507 aa) |
| | ACLA_011130 | RNA-dependent RNA polymerase. (1313 aa) |
| | ACLA_011320 | Transcription factor (Snd1/p100), putative. (921 aa) |
| | ACLA_011460 | ATP binding protein, putative. (1125 aa) |
| | ACLA_011810 | zf-C3H1 domain-containing protein. (1179 aa) |
| | ACLA_012290 | EST1_DNA_bind domain-containing protein. (817 aa) |
| | ACLA_012650 | Decapping enzyme Dcp1, putative. (331 aa) |
| | ACLA_013630 | CBF/NF-Y family transcription factor, putative. (186 aa) |
| | ACLA_013770 | Topisomerase II associated protein (Pat1), putative. (826 aa) |
| | ACLA_014520 | Uncharacterized protein. (503 aa) |
| | dcl1 | ATP-dependent helicase dcl1; Dicer-like endonuclease involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. Produces 21 to 25 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs leading to sequence-specific suppression of gene expression, called post-transcriptional gene silencing (PTGS). Part of a broad host defense response against viral infection and transposons (By similarity); Belongs to the helicase family. Dicer subfamily. (1534 aa) |
| | ACLA_015130 | Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. (504 aa) |
| | ACLA_015480 | Decapping enzyme Dcp2, putative. (856 aa) |
| | ACLA_015720 | Ubiquitin ligase subunit CulD, putative; Belongs to the cullin family. (914 aa) |
| | ACLA_015750 | GATA transcription factor (Ams2), putative. (1186 aa) |
| | ACLA_016350 | YjeF_N domain protein. (705 aa) |
| | ACLA_016520 | 3'-5' exoribonuclease (Csl4), putative. (253 aa) |
| | ACLA_060660 | Histone-lysine N-methyltransferase (Bre2), putative. (612 aa) |
| | ACLA_061080 | RNAse III, putative. (160 aa) |
| | ACLA_063800 | NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily. (329 aa) |
| | ACLA_005480 | YT521-B-like splicing factor, putative. (530 aa) |
| | LSM5 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa) |
| | ACLA_007050 | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (590 aa) |
| | ACLA_007120 | Nonsense-mediated mRNA decay factor (Upf2), putative. (1195 aa) |
| | lsm6 | U6 snRNA-associated Sm-like protein LSm6; Component of LSm protein complexes, which are involved in RNA processing and may function in a chaperone-like manner, facilitating the efficient association of RNA processing factors with their substrates. Component of the cytoplasmic LSM1-LSM7 complex, which is thought to be involved in mRNA degradation by activating the decapping step in the 5'-to-3' mRNA decay pathway. Component of the nuclear LSM2- LSM8 complex, which is involved in splicing of nuclear mRNAs. LSM2-LSM8 associates with multiple snRNP complexes containing the U6 snRNA (U4/U6 [...] (78 aa) |
| | rtt106 | Histone chaperone rtt106; Histones H3 and H4 chaperone involved in the nucleosome formation and heterochromatin silencing. Required for the deposition of H3K56ac-carrying H3-H4 complex onto newly-replicated DNA. Plays a role in the transcriptional regulation of the cell-cycle dependent histone genes by creating a repressive structure at the core histone gene promoter (By similarity). (463 aa) |
| | ACLA_089090 | RNA binding protein Jsn1, putative. (1190 aa) |
| | ACLA_089120 | mRNA decapping hydrolase, putative. (328 aa) |
| | ACLA_089440 | NF-X1 finger and helicase domain protein, putative. (1845 aa) |
| | ACLA_089850 | Translation release factor eRF3, putative. (718 aa) |
| | ACLA_089970 | Non-specific serine/threonine protein kinase. (827 aa) |
| | pan2 | PAN2-PAN3 deadenylation complex catalytic subunit pan2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein pab1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1161 aa) |
| | ACLA_090000 | Elongation factor Tu GTP binding domain protein. (806 aa) |
| | ACLA_090780 | Exosome complex endonuclease 1/ribosomal RNA processing protein, putative. (269 aa) |
| | ACLA_091880 | Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (410 aa) |
| | ACLA_092400 | Uncharacterized protein. (245 aa) |
| | ACLA_092480 | Exosome complex exonuclease Rrp40, putative. (280 aa) |
