STRINGSTRING
ACLA_037720 ACLA_037720 nop58 nop58 ACLA_018680 ACLA_018680 ACLA_033830 ACLA_033830 ACLA_093550 ACLA_093550 ACLA_092960 ACLA_092960 ACLA_092480 ACLA_092480 ACLA_090780 ACLA_090780 ACLA_008990 ACLA_008990 ACLA_000920 ACLA_000920 ACLA_019990 ACLA_019990 ACLA_021200 ACLA_021200 ACLA_037030 ACLA_037030
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACLA_037720Exosome complex exonuclease Rrp6, putative. (778 aa)
nop58Nucleolar protein 58; Required for pre-18S rRNA processing. May bind microtubules (By similarity); Belongs to the NOP5/NOP56 family. (592 aa)
ACLA_018680Cleavage and polyadenylation specifity factor, 73 kDa subunit, putative. (878 aa)
ACLA_033830Exosome complex exonuclease Rrp4, putative. (387 aa)
ACLA_093550Exosome complex subunit Rrp46, putative. (249 aa)
ACLA_092960RNA polymerase II transcription elongation factor Rtf1p, putative. (605 aa)
ACLA_092480Exosome complex exonuclease Rrp40, putative. (280 aa)
ACLA_090780Exosome complex endonuclease 1/ribosomal RNA processing protein, putative. (269 aa)
ACLA_008990Centromere/microtubule binding protein cbf5. (487 aa)
ACLA_000920RNA binding protein Nrd1, putative. (741 aa)
ACLA_019990Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (598 aa)
ACLA_021200Fibrillarin. (318 aa)
ACLA_037030HAD_SAK_1 domain-containing protein. (564 aa)
Your Current Organism:
Aspergillus clavatus
NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1
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