STRINGSTRING
ACLA_035980 ACLA_035980 ACLA_092960 ACLA_092960 ACLA_005400 ACLA_005400 ACLA_070150 ACLA_070150
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACLA_035980Polymerase (RNA) II (DNA directed) polypeptide D. (148 aa)
ACLA_092960RNA polymerase II transcription elongation factor Rtf1p, putative. (605 aa)
ACLA_005400Serine/threonine protein kinase (Kin28), putative; Belongs to the protein kinase superfamily. (404 aa)
ACLA_070150Pol II transcription elongation factor subunit Cdc73, putative. (482 aa)
Your Current Organism:
Aspergillus clavatus
NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1
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