STRINGSTRING
ACLA_054770 ACLA_054770 ACLA_010070 ACLA_010070 ACLA_061920 ACLA_061920 ACLA_005480 ACLA_005480 ACLA_007010 ACLA_007010 ACLA_091810 ACLA_091810 ACLA_038770 ACLA_038770 ACLA_048370 ACLA_048370 ACLA_052350 ACLA_052350 ACLA_034740 ACLA_034740 ACLA_002970 ACLA_002970 ACLA_076000 ACLA_076000
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACLA_054770Pre-RNA splicing factor Slt11, putative. (383 aa)
ACLA_010070Cell cycle control protein (Cwf2), putative. (418 aa)
ACLA_061920U2 auxiliary factor small subunit, putative. (209 aa)
ACLA_005480YT521-B-like splicing factor, putative. (530 aa)
ACLA_007010U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (583 aa)
ACLA_091810Pre-mRNA splicing factor (Prp8), putative. (2354 aa)
ACLA_038770Zinc knuckle transcription factor/splicing factor MSL5/ZFM1, putative. (568 aa)
ACLA_048370DEAD/DEAH box helicase, putative. (590 aa)
ACLA_052350U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (218 aa)
ACLA_034740mRNA splicing protein, putative. (484 aa)
ACLA_002970Endo-1,3(4)-beta-glucanase, putative. (398 aa)
ACLA_076000PT repeat family protein. (1885 aa)
Your Current Organism:
Aspergillus clavatus
NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1
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