23 items (Aspergillus clavatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	ACLA_007210	Uncharacterized protein. (995 aa)
	ACLA_010530	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (244 aa)
	ACLA_075370	B-block_TFIIIC domain-containing protein. (1930 aa)
	ACLA_009590	Uncharacterized protein. (507 aa)
	ACLA_058730	RNA polymerase II subunit 7. (169 aa)
	ACLA_029480	DNA-directed RNA polymerase I, II, and III subunit Rpb6. (161 aa)
	ACLA_029660	RNA polymerase III transcription factor TFIIIC subunit (Tfc4), putative. (1092 aa)
	ACLA_032490	SWIB/MDM2 domain protein. (287 aa)
	ACLA_082370	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1234 aa)
	ACLA_082490	DNA polymerase V, putative. (989 aa)
	ACLA_057700	DNA-directed rna polymerase III 25 kD polypeptide. (216 aa)
	ACLA_028760	TBP associated factor (Mot1), putative. (1901 aa)
	ACLA_027040	MYB DNA-binding domain protein. (292 aa)
	ACLA_026600	Uncharacterized protein. (998 aa)
	hht1	Histone H3; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (136 aa)
	ACLA_095950	DNA-directed RNA polymerase I and III 14 kDa polypeptide. (142 aa)
	ACLA_095890	Histone H3 variant, putative. (176 aa)
	ACLA_035020	Myb-like DNA-binding protein, putative. (909 aa)
	ACLA_051000	Metallothionein-I gene transcription activator. (76 aa)
	ACLA_048910	Uncharacterized protein. (243 aa)
	ACLA_045500	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (365 aa)
	ACLA_064940	DNA-directed RNA polymerases N/8 kDa subunit superfamily. (74 aa)
	ACLA_092960	RNA polymerase II transcription elongation factor Rtf1p, putative. (605 aa)

Your Current Organism:

Aspergillus clavatus

NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACLA_009590	ACLA_026600	A1C9W8	A1CQM2	Uncharacterized protein.	Uncharacterized protein.	0.480
ACLA_009590	ACLA_029480	A1C9W8	A1CRE9	Uncharacterized protein.	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	0.999
ACLA_009590	ACLA_051000	A1C9W8	A1CIC3	Uncharacterized protein.	Metallothionein-I gene transcription activator.	0.997
ACLA_009590	ACLA_057700	A1C9W8	A1C3X4	Uncharacterized protein.	DNA-directed rna polymerase III 25 kD polypeptide.	0.655
ACLA_009590	ACLA_064940	A1C9W8	A1CFY2	Uncharacterized protein.	DNA-directed RNA polymerases N/8 kDa subunit superfamily.	0.997
ACLA_009590	ACLA_082370	A1C9W8	A1CTA9	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
ACLA_009590	ACLA_082490	A1C9W8	A1CTC1	Uncharacterized protein.	DNA polymerase V, putative.	0.804
ACLA_009590	ACLA_095950	A1C9W8	A1CM75	Uncharacterized protein.	DNA-directed RNA polymerase I and III 14 kDa polypeptide.	0.987
ACLA_010530	ACLA_029480	A1CA59	A1CRE9	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	0.956
ACLA_010530	ACLA_029660	A1CA59	A1CRG5	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	RNA polymerase III transcription factor TFIIIC subunit (Tfc4), putative.	0.691
ACLA_010530	ACLA_051000	A1CA59	A1CIC3	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	Metallothionein-I gene transcription activator.	0.904
ACLA_010530	ACLA_057700	A1CA59	A1C3X4	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	DNA-directed rna polymerase III 25 kD polypeptide.	0.988
ACLA_010530	ACLA_064940	A1CA59	A1CFY2	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	DNA-directed RNA polymerases N/8 kDa subunit superfamily.	0.907
ACLA_010530	ACLA_082370	A1CA59	A1CTA9	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.750
ACLA_010530	ACLA_095950	A1CA59	A1CM75	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	DNA-directed RNA polymerase I and III 14 kDa polypeptide.	0.958
ACLA_026600	ACLA_009590	A1CQM2	A1C9W8	Uncharacterized protein.	Uncharacterized protein.	0.480
ACLA_026600	ACLA_029480	A1CQM2	A1CRE9	Uncharacterized protein.	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	0.475
ACLA_026600	ACLA_032490	A1CQM2	A1CS93	Uncharacterized protein.	SWIB/MDM2 domain protein.	0.443
ACLA_026600	ACLA_051000	A1CQM2	A1CIC3	Uncharacterized protein.	Metallothionein-I gene transcription activator.	0.474
ACLA_026600	ACLA_064940	A1CQM2	A1CFY2	Uncharacterized protein.	DNA-directed RNA polymerases N/8 kDa subunit superfamily.	0.475