6 items (Aspergillus clavatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACLA_080350	DNA directed RNA polymerase II 15 kDa subunit, putative. (122 aa)
	ACLA_071910	RNA polymerase II subunit 3. (333 aa)
	ACLA_005560	DNA-directed RNA polymerase II subunit RPB11a, putative. (165 aa)
	ACLA_051000	Metallothionein-I gene transcription activator. (76 aa)
	ACLA_033890	Transcription factor Rba50, putative. (483 aa)
	ACLA_029480	DNA-directed RNA polymerase I, II, and III subunit Rpb6. (161 aa)

Your Current Organism:

Aspergillus clavatus

NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACLA_005560	ACLA_029480	A1CD73	A1CRE9	DNA-directed RNA polymerase II subunit RPB11a, putative.	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	0.999
ACLA_005560	ACLA_051000	A1CD73	A1CIC3	DNA-directed RNA polymerase II subunit RPB11a, putative.	Metallothionein-I gene transcription activator.	0.999
ACLA_005560	ACLA_071910	A1CD73	A1C6Y7	DNA-directed RNA polymerase II subunit RPB11a, putative.	RNA polymerase II subunit 3.	0.999
ACLA_005560	ACLA_080350	A1CD73	A1CSR4	DNA-directed RNA polymerase II subunit RPB11a, putative.	DNA directed RNA polymerase II 15 kDa subunit, putative.	0.999
ACLA_029480	ACLA_005560	A1CRE9	A1CD73	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	DNA-directed RNA polymerase II subunit RPB11a, putative.	0.999
ACLA_029480	ACLA_051000	A1CRE9	A1CIC3	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	Metallothionein-I gene transcription activator.	0.999
ACLA_029480	ACLA_071910	A1CRE9	A1C6Y7	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	RNA polymerase II subunit 3.	0.999
ACLA_029480	ACLA_080350	A1CRE9	A1CSR4	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	DNA directed RNA polymerase II 15 kDa subunit, putative.	0.999
ACLA_051000	ACLA_005560	A1CIC3	A1CD73	Metallothionein-I gene transcription activator.	DNA-directed RNA polymerase II subunit RPB11a, putative.	0.999
ACLA_051000	ACLA_029480	A1CIC3	A1CRE9	Metallothionein-I gene transcription activator.	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	0.999
ACLA_051000	ACLA_071910	A1CIC3	A1C6Y7	Metallothionein-I gene transcription activator.	RNA polymerase II subunit 3.	0.999
ACLA_051000	ACLA_080350	A1CIC3	A1CSR4	Metallothionein-I gene transcription activator.	DNA directed RNA polymerase II 15 kDa subunit, putative.	0.999
ACLA_071910	ACLA_005560	A1C6Y7	A1CD73	RNA polymerase II subunit 3.	DNA-directed RNA polymerase II subunit RPB11a, putative.	0.999
ACLA_071910	ACLA_029480	A1C6Y7	A1CRE9	RNA polymerase II subunit 3.	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	0.999
ACLA_071910	ACLA_051000	A1C6Y7	A1CIC3	RNA polymerase II subunit 3.	Metallothionein-I gene transcription activator.	0.999
ACLA_071910	ACLA_080350	A1C6Y7	A1CSR4	RNA polymerase II subunit 3.	DNA directed RNA polymerase II 15 kDa subunit, putative.	0.999
ACLA_080350	ACLA_005560	A1CSR4	A1CD73	DNA directed RNA polymerase II 15 kDa subunit, putative.	DNA-directed RNA polymerase II subunit RPB11a, putative.	0.999
ACLA_080350	ACLA_029480	A1CSR4	A1CRE9	DNA directed RNA polymerase II 15 kDa subunit, putative.	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	0.999
ACLA_080350	ACLA_051000	A1CSR4	A1CIC3	DNA directed RNA polymerase II 15 kDa subunit, putative.	Metallothionein-I gene transcription activator.	0.999
ACLA_080350	ACLA_071910	A1CSR4	A1C6Y7	DNA directed RNA polymerase II 15 kDa subunit, putative.	RNA polymerase II subunit 3.	0.999