(4 nodes) t-UTP complex network (Aspergillus clavatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACLA_093100	Small nucleolar ribonucleoprotein complex subunit Utp15, putative. (542 aa)
	ACLA_076140	Uncharacterized protein. (924 aa)
	utp10	U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity). (1819 aa)
	ACLA_090570	Small nucleolar ribonucleoprotein complex subunit, putative. (983 aa)

Your Current Organism:

Aspergillus clavatus

NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACLA_076140	ACLA_090570	A1C853	A1CER5	Uncharacterized protein.	Small nucleolar ribonucleoprotein complex subunit, putative.	0.513
ACLA_076140	ACLA_093100	A1C853	A1CFG2	Uncharacterized protein.	Small nucleolar ribonucleoprotein complex subunit Utp15, putative.	0.457
ACLA_076140	utp10	A1C853	A1CUH7	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity).	0.467
ACLA_090570	ACLA_076140	A1CER5	A1C853	Small nucleolar ribonucleoprotein complex subunit, putative.	Uncharacterized protein.	0.513
ACLA_090570	ACLA_093100	A1CER5	A1CFG2	Small nucleolar ribonucleoprotein complex subunit, putative.	Small nucleolar ribonucleoprotein complex subunit Utp15, putative.	0.999
ACLA_090570	utp10	A1CER5	A1CUH7	Small nucleolar ribonucleoprotein complex subunit, putative.	U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity).	0.999
ACLA_093100	ACLA_076140	A1CFG2	A1C853	Small nucleolar ribonucleoprotein complex subunit Utp15, putative.	Uncharacterized protein.	0.457
ACLA_093100	ACLA_090570	A1CFG2	A1CER5	Small nucleolar ribonucleoprotein complex subunit Utp15, putative.	Small nucleolar ribonucleoprotein complex subunit, putative.	0.999
ACLA_093100	utp10	A1CFG2	A1CUH7	Small nucleolar ribonucleoprotein complex subunit Utp15, putative.	U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity).	0.999
utp10	ACLA_076140	A1CUH7	A1C853	U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity).	Uncharacterized protein.	0.467
utp10	ACLA_090570	A1CUH7	A1CER5	U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity).	Small nucleolar ribonucleoprotein complex subunit, putative.	0.999
utp10	ACLA_093100	A1CUH7	A1CFG2	U3 small nucleolar RNA-associated protein 10; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity).	Small nucleolar ribonucleoprotein complex subunit Utp15, putative.	0.999