(3 nodes) Transport protein particle (TRAPP) component network (Aspergillus clavatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACLA_015780	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (252 aa)
	ACLA_065260	Trafficking protein particle complex subunit BET3. (189 aa)
	ACLA_095310	BET3 family protein. (189 aa)

Your Current Organism:

Aspergillus clavatus

NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACLA_015780	ACLA_065260	A1CBL8	A1CG12	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Trafficking protein particle complex subunit BET3.	0.999
ACLA_015780	ACLA_095310	A1CBL8	A1CM11	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	BET3 family protein.	0.978
ACLA_065260	ACLA_015780	A1CG12	A1CBL8	Trafficking protein particle complex subunit BET3.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.999
ACLA_065260	ACLA_095310	A1CG12	A1CM11	Trafficking protein particle complex subunit BET3.	BET3 family protein.	0.987
ACLA_095310	ACLA_015780	A1CM11	A1CBL8	BET3 family protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.978
ACLA_095310	ACLA_065260	A1CM11	A1CG12	BET3 family protein.	Trafficking protein particle complex subunit BET3.	0.987