(8 nodes) 50S ribosomal protein L30e-like network (Aspergillus clavatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACLA_021850	Small nuclear ribonucleoprotein complex protein Nhp2, putative. (233 aa)
	ACLA_008950	Peptide chain release factor eRF/aRF, subunit 1. (496 aa)
	ACLA_068380	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	ACLA_086260	60S ribosomal protein L7a. (266 aa)
	ACLA_091880	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (410 aa)
	ACLA_052430	RNA methyltransferase, TrmH family family. (495 aa)
	ACLA_081010	60S ribosomal protein L30, putative. (106 aa)
	ACLA_029170	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (144 aa)

Your Current Organism:

Aspergillus clavatus

NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACLA_008950	ACLA_021850	A1C9Q7	A1CPA0	Peptide chain release factor eRF/aRF, subunit 1.	Small nuclear ribonucleoprotein complex protein Nhp2, putative.	0.550
ACLA_008950	ACLA_029170	A1C9Q7	A1CRB8	Peptide chain release factor eRF/aRF, subunit 1.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.520
ACLA_008950	ACLA_081010	A1C9Q7	A1CSY0	Peptide chain release factor eRF/aRF, subunit 1.	60S ribosomal protein L30, putative.	0.568
ACLA_008950	ACLA_086260	A1C9Q7	A1CUE0	Peptide chain release factor eRF/aRF, subunit 1.	60S ribosomal protein L7a.	0.579
ACLA_008950	ACLA_091880	A1C9Q7	A1CF41	Peptide chain release factor eRF/aRF, subunit 1.	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.590
ACLA_021850	ACLA_008950	A1CPA0	A1C9Q7	Small nuclear ribonucleoprotein complex protein Nhp2, putative.	Peptide chain release factor eRF/aRF, subunit 1.	0.550
ACLA_021850	ACLA_068380	A1CPA0	A1C5Z0	Small nuclear ribonucleoprotein complex protein Nhp2, putative.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.939
ACLA_021850	ACLA_081010	A1CPA0	A1CSY0	Small nuclear ribonucleoprotein complex protein Nhp2, putative.	60S ribosomal protein L30, putative.	0.915
ACLA_021850	ACLA_091880	A1CPA0	A1CF41	Small nuclear ribonucleoprotein complex protein Nhp2, putative.	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.457
ACLA_029170	ACLA_008950	A1CRB8	A1C9Q7	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Peptide chain release factor eRF/aRF, subunit 1.	0.520
ACLA_029170	ACLA_068380	A1CRB8	A1C5Z0	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.750
ACLA_029170	ACLA_081010	A1CRB8	A1CSY0	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	60S ribosomal protein L30, putative.	0.981
ACLA_029170	ACLA_086260	A1CRB8	A1CUE0	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	60S ribosomal protein L7a.	0.971
ACLA_029170	ACLA_091880	A1CRB8	A1CF41	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.691
ACLA_068380	ACLA_021850	A1C5Z0	A1CPA0	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Small nuclear ribonucleoprotein complex protein Nhp2, putative.	0.939
ACLA_068380	ACLA_029170	A1C5Z0	A1CRB8	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.750
ACLA_068380	ACLA_081010	A1C5Z0	A1CSY0	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	60S ribosomal protein L30, putative.	0.915
ACLA_068380	ACLA_091880	A1C5Z0	A1CF41	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.439
ACLA_081010	ACLA_008950	A1CSY0	A1C9Q7	60S ribosomal protein L30, putative.	Peptide chain release factor eRF/aRF, subunit 1.	0.568
ACLA_081010	ACLA_021850	A1CSY0	A1CPA0	60S ribosomal protein L30, putative.	Small nuclear ribonucleoprotein complex protein Nhp2, putative.	0.915