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ACLA_074630 ACLA_074630 ACLA_083810 ACLA_083810 ACLA_083000 ACLA_083000 ACLA_080400 ACLA_080400 ACLA_080350 ACLA_080350 ACLA_080290 ACLA_080290 ACLA_031570 ACLA_031570 ACLA_029480 ACLA_029480 ACLA_027540 ACLA_027540 ACLA_026870 ACLA_026870 ACLA_026290 ACLA_026290 ACLA_026140 ACLA_026140 ACLA_023760 ACLA_023760 ACLA_023200 ACLA_023200 ACLA_021550 ACLA_021550 ACLA_021310 ACLA_021310 ACLA_020830 ACLA_020830 ACLA_020720 ACLA_020720 ACLA_020630 ACLA_020630 ACLA_095410 ACLA_095410 ACLA_042010 ACLA_042010 ACLA_039700 ACLA_039700 ACLA_039310 ACLA_039310 ACLA_038510 ACLA_038510 ACLA_037980 ACLA_037980 ACLA_037920 ACLA_037920 ACLA_035980 ACLA_035980 ACLA_034050 ACLA_034050 ACLA_033860 ACLA_033860 ACLA_051120 ACLA_051120 ACLA_051000 ACLA_051000 ACLA_050750 ACLA_050750 ACLA_048280 ACLA_048280 ACLA_047860 ACLA_047860 ACLA_065630 ACLA_065630 ACLA_064940 ACLA_064940 ACLA_092960 ACLA_092960 ACLA_091690 ACLA_091690 ACLA_007050 ACLA_007050 ACLA_005560 ACLA_005560 ACLA_005400 ACLA_005400 ACLA_060570 ACLA_060570 ACLA_014650 ACLA_014650 ACLA_014550 ACLA_014550 ACLA_014170 ACLA_014170 ACLA_010290 ACLA_010290 ACLA_010010 ACLA_010010 ACLA_009130 ACLA_009130 ACLA_008810 ACLA_008810 ACLA_054010 ACLA_054010 ACLA_074620 ACLA_074620 ACLA_072610 ACLA_072610 ACLA_071910 ACLA_071910 ACLA_071490 ACLA_071490 ACLA_070150 ACLA_070150 ACLA_069970 ACLA_069970 ACLA_004700 ACLA_004700 ACLA_001850 ACLA_001850 ACLA_001520 ACLA_001520 ACLA_001500 ACLA_001500 ACLA_000810 ACLA_000810 ACLA_058910 ACLA_058910 ACLA_058730 ACLA_058730 ACLA_058720 ACLA_058720 ACLA_058350 ACLA_058350 ACLA_086380 ACLA_086380
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACLA_074630Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
ACLA_083810Transcription factor TFIID complex 145 kDa subunit, putative. (1113 aa)
ACLA_083000Uncharacterized protein. (720 aa)
ACLA_080400Nuclear cap-binding protein subunit 2. (138 aa)
ACLA_080350DNA directed RNA polymerase II 15 kDa subunit, putative. (122 aa)
ACLA_080290Transcription factor TFIIE complex alpha subunit, putative. (452 aa)
ACLA_031570Transcription initiation factor TFIID subunit, putative. (744 aa)
ACLA_029480DNA-directed RNA polymerase I, II, and III subunit Rpb6. (161 aa)
ACLA_027540Cyclin, putative; Belongs to the cyclin family. (394 aa)
ACLA_026870Transcription elongation complex subunit (Cdc68). (1019 aa)
ACLA_026290Uncharacterized protein. (468 aa)
ACLA_026140Transcription initiation factor TFIID subunit 13, putative. (170 aa)
ACLA_023760DUF4211 domain-containing protein. (463 aa)
ACLA_023200Transcriptional elongation factor Iws1, putative. (450 aa)
ACLA_021550TFIIH complex helicase Rad3, putative. (771 aa)
ACLA_021310RNA polymerase subunit. (234 aa)
ACLA_020830Transcription initiation factor TFIID, 31kD subunit, putative. (313 aa)
ACLA_020720DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1765 aa)
ACLA_020630Transcription factor TFIIA complex subunit Toa1, putative. (402 aa)
ACLA_095410Cap binding protein. (848 aa)
ACLA_042010DNA repair protein Rex1, putative. (72 aa)
ACLA_039700Uncharacterized protein. (592 aa)
ACLA_039310RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (826 aa)
ACLA_038510Transcription initiation protein. (350 aa)
ACLA_037980RNA polymerase I and III transcription factor complex component Tbp, putative. (273 aa)
ACLA_037920Cyclin; Belongs to the cyclin family. (586 aa)
ACLA_035980Polymerase (RNA) II (DNA directed) polypeptide D. (148 aa)
ACLA_034050Transcription initiation factor TFIID subunit 12, putative. (630 aa)
ACLA_033860Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1421 aa)
ACLA_051120TPR domain protein. (400 aa)
ACLA_051000Metallothionein-I gene transcription activator. (76 aa)
ACLA_050750RNA polymerase II transcription factor, putative. (644 aa)
ACLA_048280CDK-activating kinase assembly factor MAT1. (382 aa)
ACLA_047860Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1045 aa)
ACLA_065630DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1257 aa)
ACLA_064940DNA-directed RNA polymerases N/8 kDa subunit superfamily. (74 aa)
ACLA_092960RNA polymerase II transcription elongation factor Rtf1p, putative. (605 aa)
ACLA_091690NDC10_II domain-containing protein. (166 aa)
ACLA_007050FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (590 aa)
ACLA_005560DNA-directed RNA polymerase II subunit RPB11a, putative. (165 aa)
ACLA_005400Serine/threonine protein kinase (Kin28), putative; Belongs to the protein kinase superfamily. (404 aa)
ACLA_060570Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (717 aa)
ACLA_014650Transcription factor TFIIH subunit Tfb4, putative. (386 aa)
ACLA_014550Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (286 aa)
ACLA_014170DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (145 aa)
ACLA_010290Cyclin Ccl1, putative; Belongs to the cyclin family. (440 aa)
ACLA_010010Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (120 aa)
ACLA_009130RNA polymerase II transcription elongation factor (Ctr9), putative. (1229 aa)
ACLA_008810Protein kinase domain protein. (552 aa)
ACLA_054010RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (478 aa)
ACLA_074620Uncharacterized protein. (360 aa)
ACLA_072610Transcription initiation factor TFIID subunit 7, putative. (484 aa)
ACLA_071910RNA polymerase II subunit 3. (333 aa)
ACLA_071490Uncharacterized protein. (706 aa)
ACLA_070150Pol II transcription elongation factor subunit Cdc73, putative. (482 aa)
ACLA_069970Uncharacterized protein. (560 aa)
ACLA_004700Uncharacterized protein. (391 aa)
ACLA_001850TFIIH complex helicase Ssl2, putative. (823 aa)
ACLA_001520Transcription initiation factor TFIID subunit beta, putative. (521 aa)
ACLA_001500Transcription initiation factor TFIID complex 60 kDa subunit. (448 aa)
ACLA_000810General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (456 aa)
ACLA_058910Transcription initiation factor iif, beta subunit. (374 aa)
ACLA_058730RNA polymerase II subunit 7. (169 aa)
ACLA_058720Uncharacterized protein. (508 aa)
ACLA_058350Uncharacterized protein. (1269 aa)
ACLA_086380Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (294 aa)
Your Current Organism:
Aspergillus clavatus
NCBI taxonomy Id: 344612
Other names: A. clavatus NRRL 1, Aspergillus clavatus NRRL 1
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