STRINGSTRING
RbsC_1 RbsC_1 RbsA_1 RbsA_1 AlsB AlsB CcpA CcpA RbsB_2 RbsB_2 RbsA_3 RbsA_3 RbsC_3 RbsC_3 RbsR RbsR AraR_2 AraR_2 RbsC_2 RbsC_2 rbsA rbsA RbsB_1 RbsB_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RbsC_1COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (335 aa)
RbsA_1Ribose transport ATP-binding protein RbsA; COG1129 ABC-type sugar transport system, ATPase component. (518 aa)
AlsBD-ribose-binding periplasmic protein; COG1879 ABC-type sugar transport system, periplasmic component. (325 aa)
CcpARibose operon repressor RbsR; COG1609 Transcriptional regulators. (344 aa)
RbsB_2Ribose ABC transporter (ribose-binding periplasmic component); COG1879 ABC-type sugar transport system, periplasmic component. (321 aa)
RbsA_3ABC transporter related protein; COG1129 ABC-type sugar transport system, ATPase component. (501 aa)
RbsC_3COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (313 aa)
RbsRRibose operon repressor; COG1609 Transcriptional regulators. (363 aa)
AraR_2COG1609 Transcriptional regulators. (405 aa)
RbsC_2Sugar ABC transporter permease protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (327 aa)
rbsASugar (D-ribose) ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (510 aa)
RbsB_1ABC transporter sugar-binding protein; COG1879 ABC-type sugar transport system, periplasmic component. (375 aa)
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.