STRINGSTRING
RbsC_1 RbsC_1 RbsA_1 RbsA_1 AlsB AlsB RbsB_2 RbsB_2 RbsA_3 RbsA_3 RbsC_3 RbsC_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RbsC_1COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (335 aa)
RbsA_1Ribose transport ATP-binding protein RbsA; COG1129 ABC-type sugar transport system, ATPase component. (518 aa)
AlsBD-ribose-binding periplasmic protein; COG1879 ABC-type sugar transport system, periplasmic component. (325 aa)
RbsB_2Ribose ABC transporter (ribose-binding periplasmic component); COG1879 ABC-type sugar transport system, periplasmic component. (321 aa)
RbsA_3ABC transporter related protein; COG1129 ABC-type sugar transport system, ATPase component. (501 aa)
RbsC_3COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (313 aa)
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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