(59 nodes) Peptidase M12A network (Strongyloides ratti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090KX29	Collagen alpha-5(IV) chain. (301 aa)
	A0A090L4D5	Metalloendopeptidase. (673 aa)
	A0A090L6Q3	CUB domain-containing protein. (669 aa)
	A0A090L8A5	Metalloendopeptidase. (400 aa)
	A0A090L919	Metalloendopeptidase. (852 aa)
	A0A090L9D1	Metalloendopeptidase. (435 aa)
	A0A090L9U4	Metalloendopeptidase. (274 aa)
	A0A090LD62	annotation not available (407 aa)
	A0A090LD63	Bifid. (527 aa)
	A0A090LEG2	Zinc metalloproteinase. (631 aa)
	A0A090LFN4	Metalloendopeptidase. (434 aa)
	A0A090LI24	Uncharacterized protein. (200 aa)
	A0A090LII6	Metalloendopeptidase. (573 aa)
	A0A090LJ41	Cubilin. (4137 aa)
	A0A090LJ83	Metalloendopeptidase. (392 aa)
	A0A090LJG2	Metalloendopeptidase. (433 aa)
	A0A090LJH6	Metalloendopeptidase. (389 aa)
	A0A090LJK3	Metalloendopeptidase. (390 aa)
	A0A090LKC7	Metalloendopeptidase. (434 aa)
	A0A090LKI3	Metalloendopeptidase. (380 aa)
	A0A090LKI9	Metalloendopeptidase. (371 aa)
	A0A090LKJ0	Zinc metalloproteinase. (468 aa)
	A0A090LL44	Metalloendopeptidase. (417 aa)
	A0A090LLC4	Zinc metalloproteinase. (484 aa)
	A0A090LLD0	Metalloendopeptidase. (403 aa)
	A0A090LLD6	Metalloendopeptidase. (116 aa)
	A0A090LLE2	Metalloendopeptidase. (403 aa)
	A0A090LLE6	Metalloendopeptidase. (402 aa)
	A0A090LLM1	Metalloendopeptidase. (117 aa)
	A0A090LLW4	Zinc metalloproteinase. (626 aa)
	A0A090LNF9	Metalloendopeptidase. (507 aa)
	A0A090LNY9	Metalloendopeptidase. (378 aa)
	A0A090LP04	Metalloendopeptidase. (379 aa)
	A0A090LP40	Metalloendopeptidase. (380 aa)
	A0A090LPD4	Metalloendopeptidase. (386 aa)
	A0A090LQ86	Metalloendopeptidase. (385 aa)
	A0A090LR19	Metalloendopeptidase. (387 aa)
	A0A090LR20	Metalloendopeptidase. (403 aa)
	A0A090LRW1	Metalloendopeptidase. (383 aa)
	A0A090LRX7	Metalloendopeptidase. (381 aa)
	A0A090LTZ8	Metalloendopeptidase. (500 aa)
	A0A090LV94	Metalloendopeptidase. (313 aa)
	A0A090MFW9	Metalloendopeptidase. (310 aa)
	A0A090MWC8	Collagen alpha-5(IV) chain. (302 aa)
	A0A090MXS2	Metalloendopeptidase. (319 aa)
	A0A090MY43	CUB domain and Low-density lipoprotein (LDL) receptor class A repeat-containing protein. (580 aa)
	A0A090MYG9	Metalloendopeptidase. (362 aa)
	A0A090MZ34	Metalloendopeptidase. (415 aa)
	A0A090MZ36	Metalloendopeptidase. (414 aa)
	A0A090MZB7	Metalloendopeptidase. (265 aa)
	A0A090MZH1	Metalloendopeptidase. (404 aa)
	A0A090MZS4	Metalloendopeptidase. (400 aa)
	A0A090N001	Zinc metalloproteinase. (455 aa)
	A0A090N014	Metalloendopeptidase. (408 aa)
	A0A090N023	Metalloendopeptidase. (387 aa)
	A0A090N0A4	Metalloendopeptidase. (385 aa)
	A0A090N0F9	Metalloendopeptidase. (424 aa)
	A0A090N0G7	Metalloendopeptidase. (396 aa)
	A0A090N6B5	Metalloendopeptidase. (422 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KX29	A0A090L6Q3	Collagen alpha-5(IV) chain.	CUB domain-containing protein.	0.406
A0A090KX29	A0A090LJ41	Collagen alpha-5(IV) chain.	Cubilin.	0.504
A0A090KX29	A0A090LLW4	Collagen alpha-5(IV) chain.	Zinc metalloproteinase.	0.443
A0A090KX29	A0A090MY43	Collagen alpha-5(IV) chain.	CUB domain and Low-density lipoprotein (LDL) receptor class A repeat-containing protein.	0.406
A0A090L6Q3	A0A090KX29	CUB domain-containing protein.	Collagen alpha-5(IV) chain.	0.406
A0A090L6Q3	A0A090LD62	CUB domain-containing protein.	annotation not available	0.672
A0A090L6Q3	A0A090LD63	CUB domain-containing protein.	Bifid.	0.672
A0A090L6Q3	A0A090MWC8	CUB domain-containing protein.	Collagen alpha-5(IV) chain.	0.406
A0A090L6Q3	A0A090MY43	CUB domain-containing protein.	CUB domain and Low-density lipoprotein (LDL) receptor class A repeat-containing protein.	0.706
A0A090L8A5	A0A090LJ41	Metalloendopeptidase.	Cubilin.	0.505
A0A090L9D1	A0A090LJ41	Metalloendopeptidase.	Cubilin.	0.505
A0A090L9U4	A0A090LII6	Metalloendopeptidase.	Metalloendopeptidase.	0.518
A0A090L9U4	A0A090LJ41	Metalloendopeptidase.	Cubilin.	0.505
A0A090L9U4	A0A090LJH6	Metalloendopeptidase.	Metalloendopeptidase.	0.521
A0A090L9U4	A0A090LKI3	Metalloendopeptidase.	Metalloendopeptidase.	0.457
A0A090L9U4	A0A090LP40	Metalloendopeptidase.	Metalloendopeptidase.	0.408
A0A090L9U4	A0A090LPD4	Metalloendopeptidase.	Metalloendopeptidase.	0.435
A0A090L9U4	A0A090MZS4	Metalloendopeptidase.	Metalloendopeptidase.	0.478
A0A090L9U4	A0A090N014	Metalloendopeptidase.	Metalloendopeptidase.	0.506
A0A090L9U4	A0A090N023	Metalloendopeptidase.	Metalloendopeptidase.	0.419