25 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090KYD5	RING-box protein 2. (194 aa)
	A0A090L1T7	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (114 aa)
	A0A090L2K6	RING-box protein 2. (107 aa)
	A0A090L3I5	Belongs to the SKP1 family. (155 aa)
	A0A090L4N1	Nrf2-associated protein keap1b. (545 aa)
	A0A090L5D5	annotation not available (573 aa)
	A0A090L8N1	NEDD8. (118 aa)
	A0A090L9S0	NEDD8-activating enzyme E1 catalytic subunit. (412 aa)
	A0A090LAI7	E3 ubiquitin-protein ligase RBX1. (108 aa)
	A0A090LB73	Cullin 1a; Belongs to the cullin family. (778 aa)
	A0A090LDD9	Cullin, N-terminal domain and Cullin repeat-like-containing domain-containing protein; Belongs to the cullin family. (277 aa)
	A0A090LDW9	Transcription elongation factor B polypeptide 2. (120 aa)
	A0A090LIL8	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (261 aa)
	A0A090LKK1	Cullin 1a; Belongs to the cullin family. (784 aa)
	A0A090LKK3	Si:dkey-72g22.1. (1294 aa)
	A0A090LMS6	Uncharacterized protein. (904 aa)
	A0A090LP48	GH26238p2. (556 aa)
	A0A090LP67	JmjC domain-containing protein. (276 aa)
	A0A090LP73	JmjC domain-containing protein. (356 aa)
	A0A090LPZ3	Transcription elongation factor B polypeptide 3. (417 aa)
	A0A090LVD8	JmjC domain-containing protein. (506 aa)
	A0A090MWQ0	Belongs to the SKP1 family. (656 aa)
	A0A090MXW6	Cullin 1a; Belongs to the cullin family. (444 aa)
	A0A090MYP3	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (116 aa)
	A0A090MZP4	Cullin-5; Belongs to the cullin family. (1259 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KYD5	A0A090L1T7	RING-box protein 2.	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.	0.873
A0A090KYD5	A0A090L3I5	RING-box protein 2.	Belongs to the SKP1 family.	0.893
A0A090KYD5	A0A090L4N1	RING-box protein 2.	Nrf2-associated protein keap1b.	0.880
A0A090KYD5	A0A090L5D5	RING-box protein 2.	annotation not available	0.880
A0A090KYD5	A0A090L8N1	RING-box protein 2.	NEDD8.	0.909
A0A090KYD5	A0A090L9S0	RING-box protein 2.	NEDD8-activating enzyme E1 catalytic subunit.	0.738
A0A090KYD5	A0A090LAI7	RING-box protein 2.	E3 ubiquitin-protein ligase RBX1.	0.739
A0A090KYD5	A0A090LB73	RING-box protein 2.	Cullin 1a; Belongs to the cullin family.	0.949
A0A090KYD5	A0A090LDD9	RING-box protein 2.	Cullin, N-terminal domain and Cullin repeat-like-containing domain-containing protein; Belongs to the cullin family.	0.850
A0A090KYD5	A0A090LDW9	RING-box protein 2.	Transcription elongation factor B polypeptide 2.	0.952
A0A090KYD5	A0A090LIL8	RING-box protein 2.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.857
A0A090KYD5	A0A090LKK1	RING-box protein 2.	Cullin 1a; Belongs to the cullin family.	0.850
A0A090KYD5	A0A090LKK3	RING-box protein 2.	Si:dkey-72g22.1.	0.865
A0A090KYD5	A0A090LMS6	RING-box protein 2.	Uncharacterized protein.	0.706
A0A090KYD5	A0A090LP48	RING-box protein 2.	GH26238p2.	0.636
A0A090KYD5	A0A090LP67	RING-box protein 2.	JmjC domain-containing protein.	0.848
A0A090KYD5	A0A090LP73	RING-box protein 2.	JmjC domain-containing protein.	0.848
A0A090KYD5	A0A090LVD8	RING-box protein 2.	JmjC domain-containing protein.	0.848
A0A090KYD5	A0A090MWQ0	RING-box protein 2.	Belongs to the SKP1 family.	0.893
A0A090KYD5	A0A090MXW6	RING-box protein 2.	Cullin 1a; Belongs to the cullin family.	0.850