6 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090KZL5	Parafibromin. (556 aa)
	A0A090L423	RNA polymerase-associated protein Ctr9 homolog. (1031 aa)
	A0A090LCW0	RNA polymerase-associated protein LEO1. (413 aa)
	A0A090LG02	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (414 aa)
	A0A090MW43	RNA polymerase-associated protein RTF1 homolog. (550 aa)
	A0A090MYQ9	FACT complex subunit SPT16. (1034 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090KZL5	A0A090L423	Parafibromin.	RNA polymerase-associated protein Ctr9 homolog.	0.940
A0A090KZL5	A0A090LCW0	Parafibromin.	RNA polymerase-associated protein LEO1.	0.999
A0A090KZL5	A0A090LG02	Parafibromin.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.996
A0A090KZL5	A0A090MW43	Parafibromin.	RNA polymerase-associated protein RTF1 homolog.	0.998
A0A090KZL5	A0A090MYQ9	Parafibromin.	FACT complex subunit SPT16.	0.998
A0A090L423	A0A090KZL5	RNA polymerase-associated protein Ctr9 homolog.	Parafibromin.	0.940
A0A090L423	A0A090LCW0	RNA polymerase-associated protein Ctr9 homolog.	RNA polymerase-associated protein LEO1.	0.999
A0A090L423	A0A090LG02	RNA polymerase-associated protein Ctr9 homolog.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.933
A0A090L423	A0A090MW43	RNA polymerase-associated protein Ctr9 homolog.	RNA polymerase-associated protein RTF1 homolog.	0.922
A0A090L423	A0A090MYQ9	RNA polymerase-associated protein Ctr9 homolog.	FACT complex subunit SPT16.	0.926
A0A090LCW0	A0A090KZL5	RNA polymerase-associated protein LEO1.	Parafibromin.	0.999
A0A090LCW0	A0A090L423	RNA polymerase-associated protein LEO1.	RNA polymerase-associated protein Ctr9 homolog.	0.999
A0A090LCW0	A0A090LG02	RNA polymerase-associated protein LEO1.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.999
A0A090LCW0	A0A090MW43	RNA polymerase-associated protein LEO1.	RNA polymerase-associated protein RTF1 homolog.	0.999
A0A090LCW0	A0A090MYQ9	RNA polymerase-associated protein LEO1.	FACT complex subunit SPT16.	0.999
A0A090LG02	A0A090KZL5	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Parafibromin.	0.996
A0A090LG02	A0A090L423	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	RNA polymerase-associated protein Ctr9 homolog.	0.933
A0A090LG02	A0A090LCW0	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	RNA polymerase-associated protein LEO1.	0.999
A0A090LG02	A0A090MW43	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	RNA polymerase-associated protein RTF1 homolog.	0.994
A0A090LG02	A0A090MYQ9	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	FACT complex subunit SPT16.	0.999