5 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090L4L7	annotation not available (751 aa)
	A0A090LGL4	ATP-binding cassette sub-family B member 9. (884 aa)
	A0A090LHB5	Uncharacterized protein. (97 aa)
	A0A090LK77	ATP-binding cassette sub-family B member 9. (2046 aa)
	A0A090LKK0	ATP-binding cassette sub-family B member 9. (853 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090L4L7	A0A090LGL4	annotation not available	ATP-binding cassette sub-family B member 9.	0.552
A0A090L4L7	A0A090LK77	annotation not available	ATP-binding cassette sub-family B member 9.	0.552
A0A090L4L7	A0A090LKK0	annotation not available	ATP-binding cassette sub-family B member 9.	0.552
A0A090LGL4	A0A090L4L7	ATP-binding cassette sub-family B member 9.	annotation not available	0.552
A0A090LGL4	A0A090LHB5	ATP-binding cassette sub-family B member 9.	Uncharacterized protein.	0.647
A0A090LGL4	A0A090LKK0	ATP-binding cassette sub-family B member 9.	ATP-binding cassette sub-family B member 9.	0.821
A0A090LHB5	A0A090LGL4	Uncharacterized protein.	ATP-binding cassette sub-family B member 9.	0.647
A0A090LHB5	A0A090LK77	Uncharacterized protein.	ATP-binding cassette sub-family B member 9.	0.647
A0A090LHB5	A0A090LKK0	Uncharacterized protein.	ATP-binding cassette sub-family B member 9.	0.647
A0A090LK77	A0A090L4L7	ATP-binding cassette sub-family B member 9.	annotation not available	0.552
A0A090LK77	A0A090LHB5	ATP-binding cassette sub-family B member 9.	Uncharacterized protein.	0.647
A0A090LK77	A0A090LKK0	ATP-binding cassette sub-family B member 9.	ATP-binding cassette sub-family B member 9.	0.817
A0A090LKK0	A0A090L4L7	ATP-binding cassette sub-family B member 9.	annotation not available	0.552
A0A090LKK0	A0A090LGL4	ATP-binding cassette sub-family B member 9.	ATP-binding cassette sub-family B member 9.	0.821
A0A090LKK0	A0A090LHB5	ATP-binding cassette sub-family B member 9.	Uncharacterized protein.	0.647
A0A090LKK0	A0A090LK77	ATP-binding cassette sub-family B member 9.	ATP-binding cassette sub-family B member 9.	0.817