11 items (Strongyloides ratti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090L0P1	ATP-binding cassette sub-family C member 8. (1633 aa)
	A0A090L4A0	ATP-binding cassette sub-family G member 2. (657 aa)
	A0A090L5M9	ABC transporter B family member 5. (1252 aa)
	A0A090LDT5	ATP-binding cassette sub-family G member 2. (627 aa)
	A0A090LGY0	PDZ domain-containing protein. (445 aa)
	A0A090LI25	LP14331p. (1280 aa)
	A0A090LUP1	ATP-binding cassette sub-family C member 8. (1640 aa)
	A0A090LV57	ATP-binding cassette sub-family G member 2. (691 aa)
	A0A090MVX9	ATP-binding cassette sub-family G member 2. (645 aa)
	A0A090MZY5	Canalicular multispecific organic anion transporter 1. (1335 aa)
	A0A090N0Q6	ATP-binding cassette sub-family C member 8. (1305 aa)

Your Current Organism:

Strongyloides ratti

NCBI taxonomy Id: 34506
Other names: S. ratti

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A090L0P1	A0A090L4A0	ATP-binding cassette sub-family C member 8.	ATP-binding cassette sub-family G member 2.	0.609
A0A090L0P1	A0A090L5M9	ATP-binding cassette sub-family C member 8.	ABC transporter B family member 5.	0.524
A0A090L0P1	A0A090LDT5	ATP-binding cassette sub-family C member 8.	ATP-binding cassette sub-family G member 2.	0.609
A0A090L0P1	A0A090LGY0	ATP-binding cassette sub-family C member 8.	PDZ domain-containing protein.	0.704
A0A090L0P1	A0A090LI25	ATP-binding cassette sub-family C member 8.	LP14331p.	0.524
A0A090L0P1	A0A090LV57	ATP-binding cassette sub-family C member 8.	ATP-binding cassette sub-family G member 2.	0.609
A0A090L0P1	A0A090MVX9	ATP-binding cassette sub-family C member 8.	ATP-binding cassette sub-family G member 2.	0.609
A0A090L4A0	A0A090L0P1	ATP-binding cassette sub-family G member 2.	ATP-binding cassette sub-family C member 8.	0.609
A0A090L4A0	A0A090L5M9	ATP-binding cassette sub-family G member 2.	ABC transporter B family member 5.	0.567
A0A090L4A0	A0A090LI25	ATP-binding cassette sub-family G member 2.	LP14331p.	0.567
A0A090L4A0	A0A090LUP1	ATP-binding cassette sub-family G member 2.	ATP-binding cassette sub-family C member 8.	0.609
A0A090L4A0	A0A090MZY5	ATP-binding cassette sub-family G member 2.	Canalicular multispecific organic anion transporter 1.	0.609
A0A090L4A0	A0A090N0Q6	ATP-binding cassette sub-family G member 2.	ATP-binding cassette sub-family C member 8.	0.609
A0A090L5M9	A0A090L0P1	ABC transporter B family member 5.	ATP-binding cassette sub-family C member 8.	0.524
A0A090L5M9	A0A090L4A0	ABC transporter B family member 5.	ATP-binding cassette sub-family G member 2.	0.567
A0A090L5M9	A0A090LDT5	ABC transporter B family member 5.	ATP-binding cassette sub-family G member 2.	0.567
A0A090L5M9	A0A090LGY0	ABC transporter B family member 5.	PDZ domain-containing protein.	0.436
A0A090L5M9	A0A090LUP1	ABC transporter B family member 5.	ATP-binding cassette sub-family C member 8.	0.524
A0A090L5M9	A0A090LV57	ABC transporter B family member 5.	ATP-binding cassette sub-family G member 2.	0.567
A0A090L5M9	A0A090MVX9	ABC transporter B family member 5.	ATP-binding cassette sub-family G member 2.	0.567